RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 SNRPD1P62314 119 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 SLC14A1Q13336 389 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 HNRNPDQ14103 355 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CDSNQ15517 529 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 SLC18A3Q16572 532 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ST3GAL2Q16842 350 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D25Q3MII6 688 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 PARP15Q460N3 678 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CARD16Q5EG05 197 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 DNTTIP2Q5QJE6 756 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 KAZNQ674X7 775 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 DENND2CQ68D51 928 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 KIAA0895LQ68EN5 471 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3GQ6DHY5 549 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3CQ6IPX1 549 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 NEK5Q6P3R8 708 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 LINGO4Q6UY18 593 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 H2AFVQ71UI9 128 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 NLRP14Q86W24 1093 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CNGA4Q8IV77 575 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 VSTM4Q8IW00 320 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3Q8IZP1 549 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 RYBPQ8N488 228 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 RTL3Q8N8U3 475 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 OR52K2Q8NGK3 314 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ASB10Q8WXI3 467 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CTNNBL1Q8WYA6 563 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CAVIN3Q969G5 261 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ISG20Q96AZ6 181 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 R3HDM4Q96D70 268 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 PSMB7Q99436 277 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 GTPBP2Q9BX10 602 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 DHX35Q9H5Z1 703 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 C6orf106Q9H6K1 298 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ZWILCHQ9H900 591 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 SEPSECSQ9HD40 501 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 UVRAGQ9P2Y5 699 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 IL36AQ9UHA7 158 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 PCSK1NQ9UHG2 260 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 NFU1Q9UMS0 254 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 SH2B3Q9UQQ2 575 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 PCDHGB3Q9Y5G1 929 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 NUP205Q92621 2012 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 A0A087X0T9 212 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 LNP1A1A4G5 178 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 CCDC151A5D8V7 595 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 FAM72CH0Y354 149 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 KIF2AO00139 706 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 KPNA3O00505 521 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 MPPED1O15442 326 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 PLRG1O43660 514 aaKnown RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ZMPSTE24O75844 475 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 POP4O95707 220 aaKnown RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 CER1O95813 267 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 IGSF6O95976 241 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 GSRP00390 522 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 CYP1A2P05177 515 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 FESP07332 822 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ANXA6P08133 673 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 FAM228BP0C875 321 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 TMEM225BP0DP42 221 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 CEACAM1P13688 526 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ZFXP17010 805 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 MAKP20794 623 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 AKT1P31749 480 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ACVRL1P37023 503 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 SSR1P43307 286 aaKnown RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 MAPK9P45984 424 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 NUMBP49757 651 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 DGKQP52824 942 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 C21orf59P57076 290 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 AP2B1P63010 937 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ARF5P84085 180 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 DGCR2P98153 550 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 OGDHQ02218 1023 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 KRT81Q14533 505 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 RPS6KA2Q15349 733 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 RAB6CQ53S08 254 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ODF2Q5BJF6 829 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 PPP6R3Q5H9R7 873 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 FAM72AQ5TYM5 149 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 TCEAL6Q6IPX3 200 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 FAM72DQ6L9T8 149 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 C22orf39Q6P5X5 142 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 NCEH1Q6PIU2 408 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 SARM1Q6SZW1 724 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ERN2Q76MJ5 926 aaKnown RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 RAB11FIP2Q7L804 512 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 FAM72BQ86X60 149 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 P3H2Q8IVL5 708 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 MAP7D3Q8IWC1 876 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 UMODL1-AS1Q8N2C9 162 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 PYROXD2Q8N2H3 581 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 BBS5Q8N3I7 341 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ZCCHC9Q8N567 271 aaKnown RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 NIPA2Q8N8Q9 360 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 OR2A12Q8NGT7 310 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 SUN3Q8TAQ9 357 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 NSMCE1Q8WV22 266 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 TEKT4Q8WW24 435 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms