RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TRAF6Q9Y4K3 522 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 CER1O95813 267 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 MLYCDO95822 493 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 PLOD1Q02809 727 aaPredicted RBP27.04■■□□□ 1.92
CCM2-218ENST00000541586 TUBB3Q13509 450 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 SLC9B1Q4ZJI4 515 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 OXR1Q8N573 874 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 MINDY1Q8N5J2 469 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 AGAP11Q8TF27 550 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 ERP27Q96DN0 273 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 NUF2Q9BZD4 464 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 CD244Q9BZW8 370 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 RXFP3Q9NSD7 469 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 FIS1Q9Y3D6 152 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 DNMT3AQ9Y6K1 912 aaPredicted RBP27.04■■□□□ 1.92
CCM2-218ENST00000541586 OTOGLQ3ZCN5 2332 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 ZFHX2Q9C0A1 2572 aaPredicted RBP27.03■■□□□ 1.92
CCM2-218ENST00000541586 A0A1B0GTL3 188 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 PABPN1LA6NDY0 278 aaKnown RBP27.03■■□□□ 1.92
CCM2-218ENST00000541586 ARHGEF33A8MVX0 844 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 KMOO15229 486 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 LRP3O75074 770 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 KIAA0754O94854 1291 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 JUNP05412 331 aaKnown RBP27.03■■□□□ 1.92
CCM2-218ENST00000541586 ACP5P13686 325 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 PDCD2Q16342 344 aaPredicted RBP27.03■■□□□ 1.92
CCM2-218ENST00000541586 ZNF423Q2M1K9 1284 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 KIRREL3Q8IZU9 778 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 CCL4L1Q8NHW4 92 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 LMX1AQ8TE12 382 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 FAR2Q96K12 515 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 OR2M4Q96R27 311 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 TMEM131Q92545 1883 aa27.03■■□□□ 1.92
CCM2-218ENST00000541586 MAPK9P45984 424 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 AP1S2P56377 157 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 CLEC6AQ6EIG7 209 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 AFAP1L2Q8N4X5 818 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 FOPNLQ96NB1 174 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 DPEP2Q9H4A9 486 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 APOBEC2Q9Y235 224 aaKnown RBP27.02■■□□□ 1.92
CCM2-218ENST00000541586 EP300Q09472 2414 aaPredicted RBP27.02■■□□□ 1.92
CCM2-218ENST00000541586 UBOX5O94941 541 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 CELA2BP08218 269 aaPredicted RBP27.02■■□□□ 1.92
CCM2-218ENST00000541586 FGF4P08620 206 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 MAP4P27816 1152 aaKnown RBP27.02■■□□□ 1.92
CCM2-218ENST00000541586 GDF5P43026 501 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 SHBQ15464 509 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 RBBP7Q16576 425 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 AASDHQ4L235 1098 aaPredicted RBP27.02■■□□□ 1.92
CCM2-218ENST00000541586 EEF1AKMT2Q5JPI9 291 aaKnown RBP27.02■■□□□ 1.92
CCM2-218ENST00000541586 FAM219BQ5XKK7 198 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 GOLGA7Q7Z5G4 137 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 PPP1R36Q96LQ0 422 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 LRRC61Q9BV99 259 aa27.02■■□□□ 1.92
CCM2-218ENST00000541586 A0A1B0GTQ1 180 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 KRT87PA6NCN2 255 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 CCNT2O60583 730 aaKnown RBP27.01■■□□□ 1.91
CCM2-218ENST00000541586 PIAS2O75928 621 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 CATP04040 527 aaKnown RBP27.01■■□□□ 1.91
CCM2-218ENST00000541586 TGM1P22735 817 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 AK4P27144 223 aaPredicted RBP27.01■■□□□ 1.91
CCM2-218ENST00000541586 PRDX3P30048 256 aaKnown RBP27.01■■□□□ 1.91
CCM2-218ENST00000541586 RXRGP48443 463 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 CTBSQ01459 385 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 GTF2H2Q13888 395 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 GTF2H2CQ6P1K8 395 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 METTL2BQ6P1Q9 378 aaKnown RBP27.01■■□□□ 1.91
CCM2-218ENST00000541586 PRR23CQ6ZRP0 262 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 GATAD2AQ86YP4 633 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 CLYBLQ8N0X4 340 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 TCAIMQ8N3R3 496 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 TEX9Q8N6V9 391 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 GBP7Q8N8V2 638 aaPredicted RBP27.01■■□□□ 1.91
CCM2-218ENST00000541586 KLC4Q9NSK0 619 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 UCKL1Q9NWZ5 548 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 SPASTQ9UBP0 616 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 ZFP69BQ9UJL9 534 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 KCNK6Q9Y257 313 aa27.01■■□□□ 1.91
CCM2-218ENST00000541586 TP53BP1Q12888 1972 aaPredicted RBP27■■□□□ 1.91
CCM2-218ENST00000541586 DFNA5O60443 496 aa27■■□□□ 1.91
CCM2-218ENST00000541586 GGT5P36269 586 aa27■■□□□ 1.91
CCM2-218ENST00000541586 HNMTP50135 292 aa27■■□□□ 1.91
CCM2-218ENST00000541586 RPA4Q13156 261 aa27■■□□□ 1.91
CCM2-218ENST00000541586 ZXDCQ2QGD7 858 aaPredicted RBP27■■□□□ 1.91
CCM2-218ENST00000541586 GALNTL6Q49A17 601 aa27■■□□□ 1.91
CCM2-218ENST00000541586 TAF8Q7Z7C8 310 aa27■■□□□ 1.91
CCM2-218ENST00000541586 CLNKQ7Z7G1 428 aa27■■□□□ 1.91
CCM2-218ENST00000541586 SYVN1Q86TM6 617 aa27■■□□□ 1.91
CCM2-218ENST00000541586 PRR11Q96HE9 360 aaPredicted RBP27■■□□□ 1.91
CCM2-218ENST00000541586 EDEM2Q9BV94 578 aa27■■□□□ 1.91
CCM2-218ENST00000541586 NMUR2Q9GZQ4 415 aa27■■□□□ 1.91
CCM2-218ENST00000541586 OR52A5Q9H2C5 316 aa27■■□□□ 1.91
CCM2-218ENST00000541586 WDR55Q9H6Y2 383 aaPredicted RBP27■■□□□ 1.91
CCM2-218ENST00000541586 NOL11Q9H8H0 719 aaKnown RBP27■■□□□ 1.91
CCM2-218ENST00000541586 TRNAU1APQ9NX07 287 aaKnown RBP27■■□□□ 1.91
CCM2-218ENST00000541586 OPTCQ9UBM4 332 aa27■■□□□ 1.91
CCM2-218ENST00000541586 ZNF225Q9UK10 706 aa27■■□□□ 1.91
CCM2-218ENST00000541586 DOLKQ9UPQ8 538 aa27■■□□□ 1.91
CCM2-218ENST00000541586 ST14Q9Y5Y6 855 aa27■■□□□ 1.91
CCM2-218ENST00000541586 CABIN1Q9Y6J0 2220 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms