RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 TBC1D17Q9HA65 648 aa8.46□□□□□ -1.05
THBS3-210ENST00000541576 OPTCQ9UBM4 332 aa8.46□□□□□ -1.05
THBS3-210ENST00000541576 DNMT3AQ9Y6K1 912 aaPredicted RBP8.46□□□□□ -1.05
THBS3-210ENST00000541576 ZFC3H1O60293 1989 aaKnown RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 POM121BA6NF01 834 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 ARHGEF33A8MVX0 844 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 CAPN14A8MX76 684 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 E9PBE3 544 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 STK25O00506 426 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 SDHDO14521 159 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 AZIN1O14977 448 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 KMOO15229 486 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 CCNT2O60583 730 aaKnown RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 KLHL41O60662 606 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 CRCPO75575 148 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 STK16O75716 305 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 FGF4P08620 206 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 HNRNPA2B1P22626 353 aaKnown RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 MSX2P35548 267 aaPredicted RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 HNMTP50135 292 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 CCNG1P51959 295 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 MAP7Q14244 749 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 TRIP10Q15642 601 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 LSM12Q3MHD2 195 aaKnown RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 METTL2BQ6P1Q9 378 aaKnown RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 GOLGA7Q7Z5G4 137 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 OXR1Q8N573 874 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 CCDC106Q9BWC9 280 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 TCF7L2Q9NQB0 619 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 TM7SF3Q9NS93 570 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 SLC23A2Q9UGH3 650 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 SLC17A4Q9Y2C5 497 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 ANGPTL3Q9Y5C1 460 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 LATO43561 262 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 ESRRBO95718 433 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 LMNAP02545 664 aaKnown RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 CEACAM5P06731 702 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 OXTRP30559 389 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 ARL1P40616 181 aaPredicted RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 CLDN2P57739 230 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 RPA4Q13156 261 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 FAM83HQ6ZRV2 1179 aaPredicted RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 GPRIN3Q6ZVF9 776 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 ACAD11Q709F0 780 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 SYVN1Q86TM6 617 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 DCBLD1Q8N8Z6 715 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 MIPOL1Q8TD10 442 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 ATP6V1E2Q96A05 226 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 ZNF382Q96SR6 550 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 GRIP2Q9C0E4 1043 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 C6orf106Q9H6K1 298 aaPredicted RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 NOL11Q9H8H0 719 aaKnown RBP8.46□□□□□ -1.06
THBS3-210ENST00000541576 RMI1Q9H9A7 625 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 PDP2Q9P2J9 529 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 MOSPD1Q9UJG1 213 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 CA5BQ9Y2D0 317 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 DNAJC15Q9Y5T4 150 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 VCANP13611 3396 aa8.46□□□□□ -1.06
THBS3-210ENST00000541576 PRR5-ARHGAP8B1AHC4 643 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 K7EPI3 171 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 ZNF217O75362 1048 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 HOXC4P09017 264 aaPredicted RBP8.45□□□□□ -1.06
THBS3-210ENST00000541576 ANPEPP15144 967 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 CD1EP15812 388 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 NCF2P19878 526 aaPredicted RBP8.45□□□□□ -1.06
THBS3-210ENST00000541576 AKT2P31751 481 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 GGT5P36269 586 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 BDKRB1P46663 353 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 PKNOX1P55347 436 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 SLC25A3Q00325 362 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 MMEL1Q495T6 779 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 TCHHL1Q5QJ38 904 aaPredicted RBP8.45□□□□□ -1.06
THBS3-210ENST00000541576 KANK2Q63ZY3 851 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 FAM91A1Q658Y4 838 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 TMEM198Q66K66 360 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 TTC23LQ6PF05 361 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 GALNT13Q8IUC8 556 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 ENDOVQ8N8Q3 282 aaKnown RBP8.45□□□□□ -1.06
THBS3-210ENST00000541576 OR52B6Q8NGF0 335 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 STON2Q8WXE9 905 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 PTCD3Q96EY7 689 aaKnown RBP8.45□□□□□ -1.06
THBS3-210ENST00000541576 C3orf30Q96M34 536 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 TRAPPC9Q96Q05 1148 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 IPPKQ9H8X2 491 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 LIN28AQ9H9Z2 209 aaKnown RBP8.45□□□□□ -1.06
THBS3-210ENST00000541576 PTGDR2Q9Y5Y4 395 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 NCOR1O75376 2440 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 KNL1Q8NG31 2342 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 H0Y8X5 98 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 PEX1O43933 1283 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 FUCA1P04066 466 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 CD6P30203 668 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 PIK3CGP48736 1102 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 KIAA1024LP59773 190 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 CDC16Q13042 620 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 KRT72Q14CN4 511 aa8.45□□□□□ -1.06
THBS3-210ENST00000541576 CHST15Q7LFX5 561 aaPredicted RBP8.45□□□□□ -1.06
THBS3-210ENST00000541576 RBM15BQ8NDT2 890 aaKnown RBP8.45□□□□□ -1.06
THBS3-210ENST00000541576 ZFAND2BQ8WV99 257 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms