RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 DBF4BQ8NFT6 615 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 OR11H4Q8NGC9 324 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 NXNL1Q96CM4 212 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 MOCOSQ96EN8 888 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 SFXN2Q96NB2 322 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 ABHD1Q96SE0 405 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 SYT15Q9BQS2 421 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 SYT11Q9BT88 431 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 URM1Q9BTM9 101 aaKnown RBP5.25□□□□□ -1.57
YBX3-210ENST00000540975 DPP3Q9NY33 737 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 PPIEQ9UNP9 301 aaKnown RBP5.25□□□□□ -1.57
YBX3-210ENST00000540975 NOTCH3Q9UM47 2321 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 H7C423 109 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 PTPN3P26045 913 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 MNDAP41218 407 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 MAT1AQ00266 395 aaKnown RBP5.24□□□□□ -1.57
YBX3-210ENST00000540975 ZNF415Q09FC8 603 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 LMOD3Q0VAK6 560 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 FAAP20Q6NZ36 180 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 RTN4RL2Q86UN3 420 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 KIRREL3Q8IZU9 778 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 TSPAN14Q8NG11 270 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 OR52N5Q8NH56 324 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 ANP32EQ9BTT0 268 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 FUCA2Q9BTY2 467 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 MIS12Q9H081 205 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 FBXO2Q9UK22 296 aaPredicted RBP5.24□□□□□ -1.57
YBX3-210ENST00000540975 GRID1Q9ULK0 1009 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 PADI2Q9Y2J8 665 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 TRIM17Q9Y577 477 aa5.24□□□□□ -1.57
YBX3-210ENST00000540975 MYH15Q9Y2K3 1946 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 A0A0U1RQG5 324 aaPredicted RBP5.23□□□□□ -1.57
YBX3-210ENST00000540975 ERAL1O75616 437 aaKnown RBP5.23□□□□□ -1.57
YBX3-210ENST00000540975 SORBS2O94875 1100 aaKnown RBP5.23□□□□□ -1.57
YBX3-210ENST00000540975 IGHV2-70P01814 119 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 JAK1P23458 1154 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 TAF10Q12962 218 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 SQLEQ14534 574 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 CA9Q16790 459 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 ODF4Q2M2E3 257 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 XKR6Q5GH73 641 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 GARNL3Q5VVW2 1013 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 LACC1Q8IV20 430 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 NIPA2Q8N8Q9 360 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 OR5AP2Q8NGF4 316 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 MCRIP2Q9BUT9 160 aaKnown RBP5.23□□□□□ -1.57
YBX3-210ENST00000540975 TRIM15Q9C019 465 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 KLHL4Q9C0H6 718 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 OR2B2Q9GZK3 357 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 SHARPINQ9H0F6 387 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 PRMT7Q9NVM4 692 aaPredicted RBP5.23□□□□□ -1.57
YBX3-210ENST00000540975 P4HTMQ9NXG6 502 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 HAO2Q9NYQ3 351 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 STK26Q9P289 416 aa5.23□□□□□ -1.57
YBX3-210ENST00000540975 ENO4A6NNW6 628 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 ADAM20O43506 726 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 LINGO3P0C6S8 592 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 NNMTP40261 264 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 LMAN1P49257 510 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 HNRNPKP61978 463 aaKnown RBP eCLIP5.22□□□□□ -1.57
YBX3-210ENST00000540975 IFI35P80217 286 aaPredicted RBP5.22□□□□□ -1.57
YBX3-210ENST00000540975 HSPB3Q12988 150 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 STXBP4Q6ZWJ1 553 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 ZNF689Q96CS4 500 aaPredicted RBP5.22□□□□□ -1.57
YBX3-210ENST00000540975 ZNF830Q96NB3 372 aaPredicted RBP5.22□□□□□ -1.57
YBX3-210ENST00000540975 CLEC7AQ9BXN2 247 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 GKN1Q9NS71 199 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 OLAHQ9NV23 265 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 CPSF2Q9P2I0 782 aaKnown RBP5.22□□□□□ -1.57
YBX3-210ENST00000540975 CHORDC1Q9UHD1 332 aaPredicted RBP5.22□□□□□ -1.57
YBX3-210ENST00000540975 DDX25Q9UHL0 483 aaKnown RBP5.22□□□□□ -1.57
YBX3-210ENST00000540975 MAGED1Q9Y5V3 778 aaPredicted RBP5.22□□□□□ -1.57
YBX3-210ENST00000540975 PASKQ96RG2 1323 aa5.22□□□□□ -1.57
YBX3-210ENST00000540975 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 A0A0J9YWU9 116 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 hCG_1809904A0A1W2PP81 198 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 A0A1W2PPE2 198 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 A0A1W2PR64 198 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 DCXO43602 365 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 CDH3P22223 829 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 RPL21P46778 160 aaKnown RBP5.21□□□□□ -1.58
YBX3-210ENST00000540975 LIG4P49917 911 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 ZNF75DP51815 510 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 UBXN2AP68543 259 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 HERC3Q15034 1050 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 SGSM1Q2NKQ1 1148 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 UGT3A2Q3SY77 523 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 PDLIM3Q53GG5 364 aaPredicted RBP5.21□□□□□ -1.58
YBX3-210ENST00000540975 BMP2KLQ5H9B9 411 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 SLC25A53Q5H9E4 307 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 C11orf63Q6NUN7 778 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 PTAR1Q7Z6K3 402 aaPredicted RBP5.21□□□□□ -1.58
YBX3-210ENST00000540975 ZNF440Q8IYI8 595 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 RAB42Q8N4Z0 105 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 THAP8Q8NA92 274 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 AVL9Q8NBF6 648 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 ARHGAP45Q92619 1136 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 SYN2Q92777 582 aaPredicted RBP5.21□□□□□ -1.58
YBX3-210ENST00000540975 AZIN2Q96A70 460 aa5.21□□□□□ -1.58
YBX3-210ENST00000540975 DGAT2Q96PD7 388 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms