RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 RPN2P04844 631 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 SLC35G4P0C7Q5 338 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 EBLN1P0CF75 366 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 IMPA1P29218 277 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 EPHA3P29320 983 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 CLCNKAP51800 687 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 CCNG1P51959 295 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 THOP1P52888 689 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 ERVPABLB-1P60509 514 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 ACTN3Q08043 901 aaPredicted RBP13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 BNIP1Q12981 228 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 LSM12Q3MHD2 195 aaKnown RBP13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 CCSMST1Q4G0I0 132 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 TPRG1LQ5T0D9 272 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 CAPRIN2Q6IMN6 1127 aaKnown RBP13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 PRR23BQ6ZRT6 265 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 FRMD1Q8N878 549 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 OR4F6Q8NGB9 312 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 OR9A1PQ8NGU1 263 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 ACTRT2Q8TDY3 377 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 TWIST2Q8WVJ9 160 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 TFGQ92734 400 aaPredicted RBP13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 ATP6V1E2Q96A05 226 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 OR52B2Q96RD2 323 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 KCNA7Q96RP8 456 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 ORAI3Q9BRQ5 295 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 WDR55Q9H6Y2 383 aaPredicted RBP13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 CARS2Q9HA77 564 aaKnown RBP13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 SAR1AQ9NR31 198 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 TRPS1Q9UHF7 1281 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 MOSPD1Q9UJG1 213 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 PRDM4Q9UKN5 801 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 TRIM33Q9UPN9 1127 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 ASF1AQ9Y294 204 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 GPSM3Q9Y4H4 160 aa13.85□□□□□ -0.19
CYB561A3-216ENST00000540755 GOLGA8QA0A0J9YX86 632 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 GOLGA8OA6NCC3 632 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 CFAP73A6NFT4 308 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 GOLGA8NF8WBI6 632 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 NDUFS2O75306 463 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 DNAJC8O75937 253 aaPredicted RBP13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 WDR47O94967 919 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 OR4F21O95013 312 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 CHEK2O96017 543 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 RETP07949 1114 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 IDSP22304 550 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 SPEM2Q0P670 501 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 LRP8Q14114 963 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 SIM2Q14190 667 aaPredicted RBP13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 KRT72Q14CN4 511 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 TBCCQ15814 346 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 LETMD1Q6P1Q0 360 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 AGTRAPQ6RW13 159 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 Q6ZSR6 202 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 MILR1Q7Z6M3 343 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 DCUN1D3Q8IWE4 304 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 CADM4Q8NFZ8 388 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 OR56A3Q8NH54 315 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 OR5K2Q8NHB8 316 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 CEP70Q8NHQ1 597 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 OR1E3Q8WZA6 343 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 RAD51AP1Q96B01 352 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 C19orf60Q96EN9 201 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 PDXPQ96GD0 296 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 CCT7Q99832 543 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 GPR27Q9NS67 375 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 DNAJC11Q9NVH1 559 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 SLC12A4Q9UP95 1085 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 KCNK6Q9Y257 313 aa13.84□□□□□ -0.19
CYB561A3-216ENST00000540755 KRT87PA6NCN2 255 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 METTL12A8MUP2 240 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 SLC16A8O95907 504 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 EPORP19235 508 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 PTK2BQ14289 1009 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 SPRED3Q2MJR0 410 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 GGTA1PQ4G0N0 100 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 RNF165Q6ZSG1 346 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 WDR5BQ86VZ2 330 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 FAM160A2Q8N612 972 aaPredicted RBP13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 SNX31Q8N9S9 440 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 OR13H1Q8NG92 308 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 ZNF480Q8WV37 535 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 PRR11Q96HE9 360 aaPredicted RBP13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 PPP1R36Q96LQ0 422 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 MAGEB10Q96LZ2 347 aaPredicted RBP13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 CDK15Q96Q40 435 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 CCDC106Q9BWC9 280 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 ATG10Q9H0Y0 220 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 TRIT1Q9H3H1 467 aaKnown RBP13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 OSGEPL1Q9H4B0 414 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 TUBB1Q9H4B7 451 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 PFDN4Q9NQP4 134 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 TXLNGQ9NUQ3 528 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 RAB23Q9ULC3 237 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 PSMD13Q9UNM6 376 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 SLC22A14Q9Y267 594 aa13.83□□□□□ -0.2
CYB561A3-216ENST00000540755 CAPN14A8MX76 684 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 PRR5-ARHGAP8B1AHC4 643 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms