RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TMEM121BQ9BXQ6 578 aaPredicted RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 P2RY12Q9H244 342 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 SLCO3A1Q9UIG8 710 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.78□□□□□ -0.2
INO80E-203ENST00000540562 SNX5Q9Y5X3 404 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 GON4LQ3T8J9 2241 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 MANBAO00462 879 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 OPRL1P41146 370 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 KPNA1P52294 538 aaPredicted RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 CARD16Q5EG05 197 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 UBE2R2Q712K3 238 aaPredicted RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 ZNF551Q7Z340 670 aaPredicted RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 DNAJB7Q7Z6W7 309 aaPredicted RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 CHDHQ8NE62 594 aaPredicted RBP13.78□□□□□ -0.2
INO80E-203ENST00000540562 DDHD1Q8NEL9 900 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 PIH1D2Q8WWB5 315 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 CLSTN3Q9BQT9 956 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 CD244Q9BZW8 370 aa13.78□□□□□ -0.2
INO80E-203ENST00000540562 LOC100130705A0A1B0GUX0 176 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 TMEM247A6NEH6 219 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 RFXANKO14593 260 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 PGLSO95336 258 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 JAK1P23458 1154 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 CCR7P32248 378 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 DCTP40126 519 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 FOXM1Q08050 763 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 SYT16Q17RD7 645 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 C6orf141Q5SZD1 244 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 EGFLAMQ63HQ2 1017 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 ZNF773Q6PK81 442 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.2
INO80E-203ENST00000540562 RBFAQ8N0V3 343 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 NDNFQ8TB73 568 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 PANX1Q96RD7 426 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 ZNF334Q9HCZ1 680 aaPredicted RBP13.77□□□□□ -0.2
INO80E-203ENST00000540562 IL37Q9NZH6 218 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 PPT2Q9UMR5 302 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 VPS9D1Q9Y2B5 631 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 YIPF1Q9Y548 306 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 PRUNE2Q8WUY3 3088 aa13.77□□□□□ -0.2
INO80E-203ENST00000540562 KLK8O60259 260 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 ZDHHC11BP0C7U3 371 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 POU2F1P14859 743 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 PDE12Q6L8Q7 609 aaKnown RBP13.77□□□□□ -0.21
INO80E-203ENST00000540562 NECAB2Q7Z6G3 386 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 CENPSQ8N2Z9 138 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 STON2Q8WXE9 905 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 PPP3R2Q96LZ3 170 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 ALOXE3Q9BYJ1 711 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.77□□□□□ -0.215e-6■■■□□ 17.4
INO80E-203ENST00000540562 CD320Q9NPF0 282 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 HEBP1Q9NRV9 189 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 GNPTGQ9UJJ9 305 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 TMEM202A6NGA9 273 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 FUCA1P04066 466 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 DGKAP23743 735 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 NUDT6P53370 316 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 NCS1P62166 190 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 RPS14P62263 151 aaKnown RBP13.77□□□□□ -0.21
INO80E-203ENST00000540562 ZDHHC21Q8IVQ6 265 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 EID3Q8N140 333 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 ATG16L2Q8NAA4 619 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 SMYD1Q8NB12 490 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 MCOLN3Q8TDD5 553 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 UGT2B28Q9BY64 529 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 ROGDIQ9GZN7 287 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 ABCB8Q9NUT2 735 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 CFAP97Q9P2B7 532 aa13.77□□□□□ -0.21
INO80E-203ENST00000540562 PTBP2Q9UKA9 531 aaKnown RBP13.77□□□□□ -0.21
INO80E-203ENST00000540562 FNDC1Q4ZHG4 1894 aaPredicted RBP13.76□□□□□ -0.21
INO80E-203ENST00000540562 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.76□□□□□ -0.21
INO80E-203ENST00000540562 SH3PXD2BA1X283 911 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 TYW5A2RUC4 315 aaKnown RBP13.76□□□□□ -0.21
INO80E-203ENST00000540562 BCKDKO14874 412 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 CA12O43570 354 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 PREPP48147 710 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 MADCAM1Q13477 382 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 CCSMST1Q4G0I0 132 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 IER5LQ5T953 404 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 LAIR1Q6GTX8 287 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 CYP4Z1Q86W10 505 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 CACUL1Q86Y37 369 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 MICU2Q8IYU8 434 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 KIF17Q9P2E2 1029 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 TNPO3Q9Y5L0 923 aaKnown RBP13.76□□□□□ -0.21
INO80E-203ENST00000540562 PABPN1LA6NDY0 278 aaKnown RBP13.76□□□□□ -0.21
INO80E-203ENST00000540562 BCAS1O75363 584 aaPredicted RBP13.76□□□□□ -0.21
INO80E-203ENST00000540562 UMPSP11172 480 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 ACPPP15309 386 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 DCKP27707 260 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 GABRR2P28476 465 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 OR1E2P47887 323 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 RXRGP48443 463 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 GPR153Q6NV75 609 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 AHSA2Q719I0 299 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 ARL10Q8N8L6 244 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 OR13F1Q8NGS4 319 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 C1orf109Q9NX04 203 aa13.76□□□□□ -0.21
INO80E-203ENST00000540562 PDP1Q9P0J1 537 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms