RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 SEMA5BQ9P283 1151 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 KLHL3Q9UH77 587 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 ADAMTS6Q9UKP5 1117 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 IKZF3Q9UKT9 509 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC39A10Q9ULF5 831 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 SATB2Q9UPW6 733 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 TPRP12270 2363 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 HEATR5BQ9P2D3 2071 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PIPSLA2A3N6 862 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 GSAPA4D1B5 854 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 C2orf74A8MZ97 194 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 POC1B-GALNT4F8VUJ3 575 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 TMX2-CTNND1H3BSU7 103 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC16A5O15375 505 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC16A8O95907 504 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 ALDOAP04075 364 aaKnown RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 C8GP07360 202 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 INHBAP08476 426 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 CHRM5P08912 532 aaPredicted RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC35E2BP0CK96 405 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 HGFP14210 728 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 UGT2B7P16662 529 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 MAGEA12P43365 314 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 KPNA2P52292 529 aaKnown RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC12A2P55011 1212 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 RAB10P61026 200 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 FOXK2Q01167 660 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PRKAA1Q13131 559 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC29A2Q14542 456 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 RTP5Q14D33 572 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PHKG1Q16816 387 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PPP1R3AQ16821 1122 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 C3orf38Q5JPI3 329 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SNAP47Q5SQN1 464 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 MROH9Q5TGP6 573 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 EMBQ6PCB8 327 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 TTC23LQ6PF05 361 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 IGF2-ASQ6U949 168 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SPESP1Q6UW49 350 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SBSNQ6UWP8 590 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 FAM92BQ6ZTR7 304 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 UBE2R2Q712K3 238 aaPredicted RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 RAB11FIP2Q7L804 512 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 CARFQ8N187 725 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 NKAPQ8N5F7 415 aaKnown RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 LMNTD1Q8N9Z9 388 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 OR9A1PQ8NGU1 263 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 WDR36Q8NI36 951 aaKnown RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 HMGCLL1Q8TB92 370 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 UBLCP1Q8WVY7 318 aaPredicted RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 ANKRD7Q92527 254 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 CAVIN3Q969G5 261 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 NXPE2Q96DL1 559 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 ZDHHC12Q96GR4 267 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PRR11Q96HE9 360 aaPredicted RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 UBXN10Q96LJ8 280 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PPM1MQ96MI6 270 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PKP4Q99569 1192 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 MAP3K3Q99759 626 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC12A9Q9BXP2 914 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PARD6BQ9BYG5 372 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PITPNM3Q9BZ71 974 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 NRSN2Q9GZP1 204 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 DERL2Q9GZP9 239 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 ZNF768Q9H5H4 540 aaKnown RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 POLR1BQ9H9Y6 1135 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SYTL2Q9HCH5 934 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 RRAGDQ9NQL2 400 aaPredicted RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SNX15Q9NRS6 342 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SIDT1Q9NXL6 827 aaKnown RBP6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SPHK1Q9NYA1 384 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 ACTR10Q9NZ32 417 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 FETUBQ9UGM5 382 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 ZNF180Q9UJW8 692 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 RAB21Q9UL25 225 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 PDE10AQ9Y233 779 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 LOXL2Q9Y4K0 774 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 SDK2Q58EX2 2172 aa6.75□□□□□ -1.33
LPCAT3-209ENST00000540060 MDC1Q14676 2089 aaKnown RBP6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 IGHV5-51A0A0C4DH38 117 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 A0A1W2PPV9 198 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 NPEPPSL1A6NEC2 478 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 A8MU76 341 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 AGRPO00253 132 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 CDC7O00311 574 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 PLD2O14939 933 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 ZBTB14O43829 449 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 PRICKLE3O43900 615 aaPredicted RBP6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 RASSF9O75901 435 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 KRT38O76015 456 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 DXOO77932 396 aaKnown RBP6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 SHBGP04278 402 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 MPOP05164 745 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 ENO2P09104 434 aaPredicted RBP6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 CCDC166P0CW27 439 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 CD1DP15813 335 aa6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 NELFEP18615 380 aaKnown RBP6.74□□□□□ -1.33
LPCAT3-209ENST00000540060 ITIH1P19827 911 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms