RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 DMPKQ09013 629 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 NFE2L1Q14494 772 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 SQLEQ14534 574 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 HERC3Q15034 1050 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 PTCHD3Q3KNS1 767 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 XKR7Q5GH72 579 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 TMEM198Q66K66 360 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 KIF2BQ8N4N8 673 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 CDYL2Q8N8U2 506 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 METTL6Q8TCB7 284 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 HMGB4Q8WW32 186 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 SHDQ96IW2 340 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 CATSPER2Q96P56 530 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 APOOQ9BUR5 198 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 SLC29A3Q9BZD2 475 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 OR52A5Q9H2C5 316 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 DNAJC11Q9NVH1 559 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 WNT16Q9UBV4 365 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 TIMM22Q9Y584 194 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 DOCK9Q9BZ29 2069 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 C10orf142B7Z368 130 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 ACADLP28330 430 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 HMOX2P30519 316 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 KIAA1024LP59773 190 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 GGTA1PQ4G0N0 100 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 METRNLQ641Q3 311 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 OGFOD2Q6N063 350 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 Q6ZS52 159 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 PDZD3Q86UT5 571 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 PPFIBP2Q8ND30 876 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 C3orf30Q96M34 536 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 TIMM29Q9BSF4 260 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 C1orf21Q9H246 121 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 AKTIPQ9H8T0 292 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 RIC8BQ9NVN3 520 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 CA14Q9ULX7 337 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 COPG1Q9Y678 874 aaKnown RBP16.43■□□□□ 0.22
COPS3-212ENST00000539941 SLC31A1O15431 190 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 CAPN1P07384 714 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 THRAP10827 490 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 LBPP18428 481 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 PIK3R1P27986 724 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 MAT2AP31153 395 aaKnown RBP16.42■□□□□ 0.22
COPS3-212ENST00000539941 ACSL1P33121 698 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 BDKRB1P46663 353 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 PTDSS1P48651 473 aaKnown RBP16.42■□□□□ 0.22
COPS3-212ENST00000539941 STARD6P59095 220 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 ZXDCQ2QGD7 858 aaPredicted RBP16.42■□□□□ 0.22
COPS3-212ENST00000539941 PLA2G4EQ3MJ16 856 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 RP9Q8TA86 221 aaKnown RBP16.42■□□□□ 0.22
COPS3-212ENST00000539941 SCARF2Q96GP6 870 aaPredicted RBP16.42■□□□□ 0.22
COPS3-212ENST00000539941 CDK15Q96Q40 435 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 NELL2Q99435 816 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 CENPKQ9BS16 269 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 LMAN1LQ9HAT1 526 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 STOX2Q9P2F5 926 aaPredicted RBP16.42■□□□□ 0.22
COPS3-212ENST00000539941 POLG2Q9UHN1 485 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 ZNHIT2Q9UHR6 403 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 MUTYHQ9UIF7 546 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 BLOC1S6Q9UL45 172 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 ACSL5Q9ULC5 683 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 BTRCQ9Y297 605 aa16.42■□□□□ 0.22
COPS3-212ENST00000539941 PCYT1BQ9Y5K3 369 aaPredicted RBP16.42■□□□□ 0.22
COPS3-212ENST00000539941 B2RBV5 119 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 FPGTO14772 594 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 GYG2O15488 501 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 CLDN9O95484 217 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 RPN2P04844 631 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 CEACAM5P06731 702 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 LINC00032P0C843 101 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 PRR35P0CG20 571 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 COX4I1P13073 169 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 HNRNPA2B1P22626 353 aaKnown RBP16.41■□□□□ 0.22
COPS3-212ENST00000539941 KELP23276 732 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 TPP2P29144 1249 aaPredicted RBP16.41■□□□□ 0.22
COPS3-212ENST00000539941 AGTRAPQ6RW13 159 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 FAM83HQ6ZRV2 1179 aaPredicted RBP16.41■□□□□ 0.22
COPS3-212ENST00000539941 SPATA19Q7Z5L4 167 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 SNX31Q8N9S9 440 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 TUBGCP3Q96CW5 907 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 PKP4Q99569 1192 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 TBC1D10AQ9BXI6 508 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 LTB4R2Q9NPC1 389 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 DNAAF2Q9NVR5 837 aaKnown RBP16.41■□□□□ 0.22
COPS3-212ENST00000539941 TAS2R1Q9NYW7 299 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 SLC23A2Q9UGH3 650 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 PRKAB1Q9Y478 270 aa16.41■□□□□ 0.22
COPS3-212ENST00000539941 ATP6AP2A0A1C7CYW4 349 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 TOR1BO14657 336 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 LATO43561 262 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 UGDHO60701 494 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 ATP6AP2O75787 350 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 SEMA4FO95754 770 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 EPORP19235 508 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 IMPA1P29218 277 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 OXTRP30559 389 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 MRPL19P49406 292 aaKnown RBP16.4■□□□□ 0.22
COPS3-212ENST00000539941 PFN3P60673 137 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 STX1BP61266 288 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 PCDH1Q08174 1060 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms