RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CD9P21926 228 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 SPAM1P38567 509 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 SH3BGRP55822 239 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 PTSQ03393 145 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 GTF2H3Q13889 308 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 PTCHD3Q3KNS1 767 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 RUNDC3AQ59EK9 446 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 LAIR1Q6GTX8 287 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 UBE2R2Q712K3 238 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 CEP68Q76N32 757 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 VTCN1Q7Z7D3 282 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 CHDHQ8NE62 594 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 OR7A2PQ8NGA2 310 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 ADAMTS16Q8TE57 1224 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 P2RY13Q9BPV8 354 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 TUBA8Q9NY65 449 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 A0A1W2PRU2 124 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 TOR1BO14657 336 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 INMTO95050 263 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 CRHBPP24387 322 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 DCKP27707 260 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 RPS14P62263 151 aaKnown RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 CARD16Q5EG05 197 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 CACHD1Q5VU97 1274 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 ASTLQ6HA08 431 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 DOK6Q6PKX4 331 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 CERS6Q6ZMG9 384 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 BTLAQ7Z6A9 289 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 OR8J3Q8NGG0 315 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 UBE2FQ969M7 185 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 FAM120BQ96EK7 910 aaKnown RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 MRPL9Q9BYD2 267 aaKnown RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 HMX1Q9NP08 348 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 C1orf109Q9NX04 203 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 LMCD1Q9NZU5 365 aa13.71□□□□□ -0.21
UBE3B-210ENST00000539599 HECAQ9UBI9 543 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 WARS2Q9UGM6 360 aaKnown RBP13.71□□□□□ -0.21
UBE3B-210ENST00000539599 OR2AG2A6NM03 316 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 SDC1P18827 310 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 MAP4P27816 1152 aaKnown RBP13.71□□□□□ -0.22
UBE3B-210ENST00000539599 FMO3P31513 532 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 DCTP40126 519 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 AP1S1P61966 158 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 PPP2R2BQ00005 443 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 AQP6Q13520 282 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 VEPH1Q14D04 833 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 CCSMST1Q4G0I0 132 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 ZNF773Q6PK81 442 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 THAP5Q7Z6K1 395 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 MICU2Q8IYU8 434 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 CLECL1Q8IZS7 167 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 ST13P5Q8NFI4 369 aaPredicted RBP13.71□□□□□ -0.22
UBE3B-210ENST00000539599 SORCS1Q8WY21 1168 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 ACDQ96AP0 544 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 MTERF1Q99551 399 aaKnown RBP13.71□□□□□ -0.22
UBE3B-210ENST00000539599 TMEM175Q9BSA9 504 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 C2orf49Q9BVC5 232 aaPredicted RBP13.71□□□□□ -0.22
UBE3B-210ENST00000539599 OSBPL10Q9BXB5 764 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 DOLKQ9UPQ8 538 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 INSL5Q9Y5Q6 135 aa13.71□□□□□ -0.22
UBE3B-210ENST00000539599 MYO1GB0I1T2 1018 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 YY2O15391 372 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 TULP3O75386 442 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 CLDN9O95484 217 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 FTH1P02794 183 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 COL6A1P12109 1028 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 HLA-FP30511 346 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 PLA2G16P53816 162 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 FPGSQ05932 587 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 NFATC3Q12968 1075 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 SMN1Q16637 294 aaKnown RBP13.7□□□□□ -0.22
UBE3B-210ENST00000539599 PLEKHG6Q3KR16 790 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 Q6ZNB5 142 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 Q6ZVU0 165 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 C8orf59Q8N0T1 100 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-210ENST00000539599 SPARTQ8N0X7 666 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 ZNF366Q8N895 744 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 OR13F1Q8NGS4 319 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 ELOVL6Q9H5J4 265 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 TRBV5-4A0A0C4DH59 114 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 PER2O15055 1255 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 EFEMP2O95967 443 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 SRCP12931 536 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 RPS3P23396 243 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBE3B-210ENST00000539599 AQP1P29972 269 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 NUP107P57740 925 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 RAPSNQ13702 412 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 SPCS2Q15005 226 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 RETSATQ6NUM9 610 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 DPY19L3Q6ZPD9 716 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 MIPOL1Q8TD10 442 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 USP7Q93009 1102 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-210ENST00000539599 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
UBE3B-210ENST00000539599 TRBV5-3A0A0A0MS03 114 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 BOLA2-SMG1P6H3BVE0 249 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 CPSF4O95639 269 aaKnown RBP13.69□□□□□ -0.22
UBE3B-210ENST00000539599 NUDT7P0C024 238 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 EBLN1P0CF75 366 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms