RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 DKK3Q9UBP4 350 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 PLXNA2O75051 1894 aa17.47■□□□□ 0.39
GNE-204ENST00000539208 EI24O14681 340 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 HNRNPFP52597 415 aaKnown RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 LRIF1Q5T3J3 769 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 ATG9BQ674R7 924 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 SERPINA13PQ6UXR4 307 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 ZFP28Q8NHY6 868 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 TESCQ96BS2 214 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 FBXL8Q96CD0 374 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 BEGAINQ9BUH8 593 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 THUMPD3Q9BV44 507 aaKnown RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 UGT2B28Q9BY64 529 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 KCNH6Q9H252 994 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 SMPD3Q9NY59 655 aaPredicted RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 TUBA8Q9NY65 449 aaPredicted RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 FBXO10Q9UK96 956 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 A0A1B0GTW7 788 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 TRIM64CA6NLI5 447 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 TTC34A8MYJ7 566 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 UGDHO60701 494 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 DEAF1O75398 565 aaPredicted RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 RPS9P46781 194 aaKnown RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 ALDH3B2P48448 385 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 ARSIQ5FYB1 569 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 PRSS36Q5K4E3 855 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 NAIF1Q69YI7 327 aaPredicted RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 Q6ZVL8 140 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 DPPA4Q7L190 304 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 SP7Q8TDD2 431 aaPredicted RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 ELMO1Q92556 727 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 POP5Q969H6 163 aaKnown RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 PAIP1Q9H074 479 aaKnown RBP17.46■□□□□ 0.39
GNE-204ENST00000539208 PTTG2Q9NZH5 202 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 DLGAP4Q9Y2H0 992 aa17.46■□□□□ 0.39
GNE-204ENST00000539208 DOCK6Q96HP0 2047 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 A0A096LPI6 279 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 TRIM64A6NGJ6 449 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 AREL1O15033 823 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 SCELO95171 688 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 BMP10O95393 424 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 BMPR1AP36894 532 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 PLIN5Q00G26 463 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 CHRNB3Q05901 458 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 ZNF805Q5CZA5 627 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 TRIML2Q8N7C3 387 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 BEND7Q8N7W2 519 aaPredicted RBP17.45■□□□□ 0.38
GNE-204ENST00000539208 OR10A6Q8NH74 314 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 VPS35Q96QK1 796 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 HHIPQ96QV1 700 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 NTN4Q9HB63 628 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 THEGQ9P2T0 379 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 IL36AQ9UHA7 158 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 SLC22A14Q9Y267 594 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 ELOVL7A1L3X0 281 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 SLC9A3R1O14745 358 aaPredicted RBP17.45■□□□□ 0.38
GNE-204ENST00000539208 GSTA4O15217 222 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 FGBP02675 491 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 GNAO1P09471 354 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 GSTM1P09488 218 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 HNRNPA1P09651 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
GNE-204ENST00000539208 JUPP14923 745 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 SYN1P17600 705 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 CAPGP40121 348 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 ETV3P41162 512 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 PFN3P60673 137 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 PHC1P78364 1004 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 GSTM4Q03013 218 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 PLA2G4EQ3MJ16 856 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 PYCR3Q53H96 274 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 LIPJQ5W064 366 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 FRG2Q64ET8 278 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 MSANTD1Q6ZTZ1 278 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 TECPR1Q7Z6L1 1165 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 DHRSXQ8N5I4 330 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 BTN2A2Q8WVV5 523 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 VPS50Q96JG6 964 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 FCRL1Q96LA6 429 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 FRG2BQ96QU4 278 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 RIOK2Q9BVS4 552 aaKnown RBP17.45■□□□□ 0.38
GNE-204ENST00000539208 IKZF5Q9H5V7 419 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 KAT8Q9H7Z6 458 aaKnown RBP17.45■□□□□ 0.38
GNE-204ENST00000539208 RMND5AQ9H871 391 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 SERHLQ9NQF3 203 aa17.45■□□□□ 0.38
GNE-204ENST00000539208 UPK1AO00322 258 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 PRAMEF4O60810 478 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 MTX2O75431 263 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 PSIP1O75475 530 aaKnown RBP17.44■□□□□ 0.38
GNE-204ENST00000539208 CTSLP07711 333 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 SRPRAP08240 638 aaKnown RBP17.44■□□□□ 0.38
GNE-204ENST00000539208 ETS2P15036 469 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 S100A3P33764 101 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 NEK2P51955 445 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 CYBRD1Q53TN4 286 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 LDLRAP1Q5SW96 308 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 PRAMEF9Q5VWM5 478 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 TTC33Q6PID6 262 aaPredicted RBP17.44■□□□□ 0.38
GNE-204ENST00000539208 B3GNT6Q6ZMB0 384 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 CALHM3Q86XJ0 350 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 391.6 ms