RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 ANKUB1A6NFN9 424 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 GOLGA6L10A6NI86 522 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 ARGFXA6NJG6 315 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 SMIM23A6NLE4 172 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 DPM1O60762 260 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 SOD1P00441 154 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 CCNYL3P0C7X3 344 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 OGNP20774 298 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 TTPAP49638 278 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 GFERP55789 205 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 EIF3BP55884 814 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 ITGA1P56199 1179 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 RPS18P62269 152 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 NFATC2Q13469 925 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 IL10RAQ13651 578 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 CASP8Q14790 479 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 GPR33Q49SQ1 333 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 RNF187Q5TA31 235 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 CERS6Q6ZMG9 384 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 RFLNAQ6ZTI6 216 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 LRRC6Q86X45 466 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 DCUN1D1Q96GG9 259 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 POM121Q96HA1 1249 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 OR2M4Q96R27 311 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 OR6C1Q96RD1 312 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 NUDT9Q9BW91 350 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 TBC1D10AQ9BXI6 508 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 CCDC68Q9H2F9 335 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 MOCS1Q9NZB8 636 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 NFKBIL1Q9UBC1 381 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 TBC1D29Q9UFV1 150 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 VPS9D1Q9Y2B5 631 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 TMEM98Q9Y2Y6 226 aa12.15□□□□□ -0.46
CLSTN3-208ENST00000538933 UBA6A0AVT1 1052 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 TLDC2A0PJX2 215 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 FAM159BA6NKW6 160 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 CFAP99D6REC4 459 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 UGT1A9O60656 530 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 TIAF1O95411 115 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 NUDT17P0C025 328 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 RALBP11234 206 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 UGT1A6P19224 532 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 UGT1A1P22309 533 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 UGT1A4P22310 534 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 PSMA3P25788 255 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 FOXN2P32314 431 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 SLC1A2P43004 574 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 ARCN1P48444 511 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 XIAPP98170 497 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 DPTQ07507 201 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 CTBP1Q13363 440 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 GTF2H3Q13889 308 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 EFTUD2Q15029 972 aaKnown RBP eCLIP12.14□□□□□ -0.475e-7■■■■■ 36.5
CLSTN3-208ENST00000538933 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 HENMT1Q5T8I9 393 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 LGSNQ5TDP6 509 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 CYS1Q717R9 158 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 MARK2Q7KZI7 788 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 STRA8Q7Z7C7 330 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 CROCCP2Q86T23 111 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 SLC26A11Q86WA9 606 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 HPS6Q86YV9 775 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 PLXDC1Q8IUK5 500 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 PHYKPLQ8IUZ5 450 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 GOLGA6L1Q8N7Z2 621 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 FDCSPQ8NFU4 85 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 ADAMTS17Q8TE56 1095 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 ANKRD7Q92527 254 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 ELMO2Q96JJ3 720 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 AGAP2Q99490 1192 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 CPNE1Q99829 537 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 GPR87Q9BY21 358 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 PPCSQ9HAB8 311 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 ACSS2Q9NR19 701 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 MAP10Q9P2G4 905 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 FBXO5Q9UKT4 447 aa12.14□□□□□ -0.47
CLSTN3-208ENST00000538933 F8W8V4 182 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 RASGRF2O14827 1237 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 TOX3O15405 576 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 PIAS1O75925 651 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 SLC25A14O95258 325 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 ASMTLO95671 621 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 ZNF7P17097 686 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 MSH3P20585 1137 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 ARNTP27540 789 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 PTPN4P29074 926 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 GP5P40197 560 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 PPM1FP49593 454 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 MPP1Q00013 466 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 LRP8Q14114 963 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 TESK1Q15569 626 aa12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 ZRSR2Q15696 482 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 ZXDCQ2QGD7 858 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-208ENST00000538933 KRT71Q3SY84 523 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms