RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 MAD2L1Q13257 205 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 SPCS2Q15005 226 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 DEFB115Q30KQ5 88 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 GALNT18Q6P9A2 607 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 VRK3Q8IV63 474 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CHPFQ8IZ52 775 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 AADATQ8N5Z0 425 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 HJURPQ8NCD3 748 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 PJA1Q8NG27 643 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 SELENOMQ8WWX9 145 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 HDAC2Q92769 488 aaKnown RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 APIPQ96GX9 242 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 MYOCQ99972 504 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 RBM4BQ9BQ04 359 aaKnown RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 CPPED1Q9BRF8 314 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 BEGAINQ9BUH8 593 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 RBM4Q9BWF3 364 aaKnown RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 EBPLQ9BY08 206 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 TRPS1Q9UHF7 1281 aa11.67□□□□□ -0.54
CPNE8-203ENST00000538596 TMEFF2Q9UIK5 374 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-203ENST00000538596 SCELO95171 688 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 HTR1BP28222 390 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 CD70P32970 193 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 SPAM1P38567 509 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 TMBIM6P55061 237 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 SP3Q02447 781 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 SKIV2LQ15477 1246 aaKnown RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 SF1Q15637 639 aaKnown RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 ZNF829Q3KNS6 432 aaPredicted RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 ATP13A5Q4VNC0 1218 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 RBM48Q5RL73 367 aaKnown RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 CRTC1Q6UUV9 634 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 MACC1Q6ZN28 852 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 PIWIL3Q7Z3Z3 882 aaKnown RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 DEFB128Q7Z7B8 93 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 PARP8Q8N3A8 854 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 DCAF4L2Q8NA75 395 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 GLB1L3Q8NCI6 653 aaPredicted RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 CCDC138Q96M89 665 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 TMEM175Q9BSA9 504 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 FUNDC2Q9BWH2 189 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 TBC1D23Q9NUY8 699 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 FAM8A1Q9UBU6 413 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 STOML2Q9UJZ1 356 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 BOLA2-SMG1P6H3BVE0 249 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 PRRG1O14668 218 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 PER2O15055 1255 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 PRAMEF4O60810 478 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 MTX2O75431 263 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 ABLIM3O94929 683 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 PARNO95453 639 aaKnown RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 ZNF682O95780 498 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 BCL10O95999 233 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 FTH1P02794 183 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 EFNA1P20827 205 aaPredicted RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 ITPKAP23677 461 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 GSTM2P28161 218 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 PTPN6P29350 595 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 S100A3P33764 101 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 NRIP1P48552 1158 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 CARD16Q5EG05 197 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 PRAMEF9Q5VWM5 478 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 LRRC66Q68CR7 880 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 DOK6Q6PKX4 331 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 ZNF783Q6ZMS7 281 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 DCP2Q8IU60 420 aaKnown RBP11.66□□□□□ -0.54
CPNE8-203ENST00000538596 EID3Q8N140 333 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 BORCS5Q969J3 196 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 FAIMQ9NVQ4 179 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 CD84Q9UIB8 345 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 ABCG2Q9UNQ0 655 aa11.66□□□□□ -0.54
CPNE8-203ENST00000538596 SLC1A7O00341 560 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 NRG2O14511 850 aaPredicted RBP11.65□□□□□ -0.54
CPNE8-203ENST00000538596 ANXA5P08758 320 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 SDC1P18827 310 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 LMAN2Q12907 356 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 RAPSNQ13702 412 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 ATP1A4Q13733 1029 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 SIM2Q14190 667 aaPredicted RBP11.65□□□□□ -0.54
CPNE8-203ENST00000538596 OR4F3Q6IEY1 312 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 NEK5Q6P3R8 708 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 C16orf87Q6PH81 154 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 UBE2R2Q712K3 238 aaPredicted RBP11.65□□□□□ -0.54
CPNE8-203ENST00000538596 CEP68Q76N32 757 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 CYP4Z1Q86W10 505 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 CALHM3Q86XJ0 350 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 PLPP6Q8IY26 295 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 TERB1Q8NA31 727 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 UBTD2Q8WUN7 234 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 VOPP1Q96AW1 172 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 FKBP10Q96AY3 582 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 IGSF21Q96ID5 467 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 APOLD1Q96LR9 279 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 RHNO1Q9BSD3 238 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 HTATIP2Q9BUP3 242 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 C2orf49Q9BVC5 232 aaPredicted RBP11.65□□□□□ -0.54
CPNE8-203ENST00000538596 MRPL9Q9BYD2 267 aaKnown RBP11.65□□□□□ -0.54
CPNE8-203ENST00000538596 ELOVL6Q9H5J4 265 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 TMEM9Q9P0T7 183 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms