RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MYO1GB0I1T2 1018 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 SLC2A4P14672 509 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 HLA-DPA1P20036 260 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 GZMMP51124 257 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 CREMQ03060 361 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 ABRAXAS2Q15018 415 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 DDR2Q16832 855 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 LRRC26Q2I0M4 334 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 GTDC1Q4AE62 458 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 SIGIRRQ6IA17 410 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 CCDC190Q86UF4 302 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 TEX26Q8N6G2 289 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 ARRDC4Q8NCT1 418 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 DNASE1L2Q92874 299 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 UBE2FQ969M7 185 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 DPY30Q9C005 99 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 KRT84Q9NSB2 600 aa18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 SAMD4AQ9UPU9 718 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-207ENST00000538548 LOC100506127A0A0U1RQW1 187 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 FKBP9O95302 570 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 MOCS2O96007 188 aaPredicted RBP18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 UGT2B15P54855 530 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 P3H2Q8IVL5 708 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 BEND7Q8N7W2 519 aaPredicted RBP18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 TMCO6Q96DC7 493 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 CDKN2AIPNLQ96HQ2 116 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 SDHCQ99643 169 aaPredicted RBP18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 IL1RAPQ9NPH3 570 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 TAS2R9Q9NYW1 312 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 PDP1Q9P0J1 537 aaPredicted RBP18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 KIF17Q9P2E2 1029 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 MICAL3Q7RTP6 2002 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 A0A096LPI6 279 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 SEMA3DO95025 777 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 HAPLN1P10915 354 aaPredicted RBP18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 C21orf33P30042 268 aaPredicted RBP18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 GRK5P34947 590 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 GALK2Q01415 458 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 NRG1Q02297 640 aaPredicted RBP18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 BCL7AQ4VC05 210 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 SNAP47Q5SQN1 464 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 UBXN11Q5T124 520 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 ENTHD1Q8IYW4 607 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 SETD6Q8TBK2 473 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 PRDM8Q9NQV8 689 aa18.16■□□□□ 0.5
SFSWAP-207ENST00000538548 FAM25AB3EWG3 89 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 FAM25CB3EWG5 89 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 FAM25GB3EWG6 89 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 H3BQ06 376 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 RPP38P78345 283 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 MAD2L1Q13257 205 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 ZNF517Q6ZMY9 492 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 CHCHD4Q8N4Q1 142 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 OR4F6Q8NGB9 312 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 DNAJB8Q8NHS0 232 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 MYLPFQ96A32 169 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 CPPED1Q9BRF8 314 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 PAQR5Q9NXK6 330 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 TBC1D24Q9ULP9 559 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 CCL27Q9Y4X3 112 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 IPPQ9Y573 584 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 PPP2R3BQ9Y5P8 575 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 PTGESO14684 152 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 PER2O15055 1255 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 NDUFS3O75489 264 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 KRT6AP02538 564 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 KRT6BP04259 564 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 CNPP09543 421 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 LIMK1P53667 647 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 FBXO43Q4G163 708 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 TAPT1Q6NXT6 567 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 RFPL4BQ6ZWI9 263 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 VN1R5Q7Z5H4 357 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 NRARPQ7Z6K4 114 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 C10orf111Q8N326 155 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 PGBD5Q8N414 524 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 PAF1Q8N7H5 531 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 PSD4Q8NDX1 1056 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 MYDGFQ969H8 173 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 EMID1Q96A84 441 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 OR52E6Q96RD3 313 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 MYOCQ99972 504 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 CLPBQ9H078 707 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 CLMPQ9H6B4 373 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 ZFP14Q9HCL3 533 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 ABCC13Q9NSE7 274 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 C14orf119Q9NWQ9 140 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 PSORS1C1Q9UIG5 152 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 BOLA1Q9Y3E2 137 aa18.15■□□□□ 0.5
SFSWAP-207ENST00000538548 VPS26AO75436 327 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 ERN1O75460 977 aaKnown RBP18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 ZNF682O95780 498 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 CRYZL1O95825 349 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 ABCB1P08183 1280 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 TRAPPC2P0DI81 140 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 TRAPPC2BP0DI82 140 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 SOX6P35712 828 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 PIK3CBP42338 1070 aa18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 MLLT6P55198 1093 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-207ENST00000538548 TSPY1Q01534 308 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms