RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 F8W8V4 182 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 EIF3FO00303 357 aaPredicted RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 TLX3O43711 291 aaPredicted RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 SLC16A8O95907 504 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 ANKRD34CP0C6C1 535 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 CDK4P11802 303 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 CD1DP15813 335 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 PRDX3P30048 256 aaKnown RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 SHMT2P34897 504 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 PHBP35232 272 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 SPRP35270 261 aaPredicted RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 GABRA4P48169 554 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 RAB28P51157 221 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 GABREP78334 506 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 POU4F1Q01851 419 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 KRT33BQ14525 404 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 TSNQ15631 228 aaKnown RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 CYP2A13Q16696 494 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 SUSD1Q6UWL2 747 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 UBE2R2Q712K3 238 aaPredicted RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 OOSP2Q86WS3 158 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 CYP4X1Q8N118 509 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 FBXO15Q8NCQ5 510 aaPredicted RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 OR9A1PQ8NGU1 263 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 EPS8L3Q8TE67 593 aaKnown RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 KCTD4Q8WVF5 259 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 KLHL6Q8WZ60 621 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 GPR78Q96P69 363 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 EPB41L1Q9H4G0 881 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 ZNF768Q9H5H4 540 aaKnown RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 GPAMQ9HCL2 828 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 FAM60AQ9NP50 221 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 SLC6A20Q9NP91 592 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 FOXJ2Q9P0K8 574 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 STOX2Q9P2F5 926 aaPredicted RBP12.65□□□□□ -0.38
CHFR-216ENST00000538235 ASB1Q9Y576 335 aa12.65□□□□□ -0.38
CHFR-216ENST00000538235 AHCTF1Q8WYP5 2266 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 ACACBO00763 2458 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 EXOC1LA0A1B0GW35 172 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 GSAPA4D1B5 854 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 TLCD2A6NGC4 264 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 C9orf172C9J069 976 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 E7ENX8 843 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 TAF4O00268 1085 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 BRINP1O60477 761 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 TIAF1O95411 115 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 EBLN1P0CF75 366 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 FOLR1P15328 257 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 IL2P60568 153 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 RAB10P61026 200 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 SNRPNP63162 240 aaKnown RBP12.64□□□□□ -0.39
CHFR-216ENST00000538235 TAP2Q03519 686 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 RTP5Q14D33 572 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 CLPPQ16740 277 aaPredicted RBP12.64□□□□□ -0.39
CHFR-216ENST00000538235 FBXO48Q5FWF7 155 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 KIAA1614Q5VZ46 1190 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 FAM219BQ5XKK7 198 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 SPESP1Q6UW49 350 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 CEP128Q6ZU80 1094 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 RAB11FIP2Q7L804 512 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 OR2A1Q8NGT9 310 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 HMGCLL1Q8TB92 370 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 UBXN4Q92575 508 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 CAVIN3Q969G5 261 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 ZBTB9Q96C00 473 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 PDLIM5Q96HC4 596 aaKnown RBP12.64□□□□□ -0.39
CHFR-216ENST00000538235 SLC41A2Q96JW4 573 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 TMEM74Q96NL1 305 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 TRAPPC9Q96Q05 1148 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 SLC12A9Q9BXP2 914 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 TSPYL1Q9H0U9 437 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 PISDQ9UG56 409 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 POLG2Q9UHN1 485 aa12.64□□□□□ -0.39
CHFR-216ENST00000538235 PIPSLA2A3N6 862 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 SLC9B1P1A6NJY1 282 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 EFCAB7A8K855 629 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 TRIM49D1C9J1S8 452 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 RFPL1O75677 317 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 CATP04040 527 aaKnown RBP12.63□□□□□ -0.39
CHFR-216ENST00000538235 C2P06681 752 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 CCDC166P0CW27 439 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 STMN1P16949 149 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 PPM1FP49593 454 aaPredicted RBP12.63□□□□□ -0.39
CHFR-216ENST00000538235 CSHL1Q14406 222 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 DEFB110Q30KQ9 67 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 CACHD1Q5VU97 1274 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 FCRL6Q6DN72 434 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 UGT3A1Q6NUS8 523 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 FOXR1Q6PIV2 292 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 ADGRD1Q6QNK2 874 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 PLXDC1Q8IUK5 500 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 MYO1HQ8N1T3 1032 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 GABPB2Q8TAK5 448 aaPredicted RBP12.63□□□□□ -0.39
CHFR-216ENST00000538235 UBLCP1Q8WVY7 318 aaPredicted RBP12.63□□□□□ -0.39
CHFR-216ENST00000538235 RAD51AP1Q96B01 352 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 NXNL1Q96CM4 212 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 OR4K3Q96R72 315 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms