RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 TWIST2Q8WVJ9 160 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 CENPIQ92674 756 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 ITCHQ96J02 903 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 ACOX2Q99424 681 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 LPIN3Q9BQK8 851 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 UQCC2Q9BRT2 126 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 RHNO1Q9BSD3 238 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 PRDM12Q9H4Q4 367 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 PRDM8Q9NQV8 689 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 INTS7Q9NVH2 962 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 IL20Q9NYY1 176 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 RCOR3Q9P2K3 495 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 OGDHLQ9ULD0 1010 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 ERVW-1Q9UQF0 538 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 INVSQ9Y283 1065 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 KCNE2Q9Y6J6 123 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 CASTOR2A6NHX0 329 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 M0R082 166 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 PLD2O14939 933 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 TFECO14948 347 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 NDUFA2O43678 99 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 POMCP01189 267 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 C1QBP02746 253 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 PFKMP08237 780 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 HLA-DMAP28067 261 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 CA5AP35218 305 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 SOX6P35712 828 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 ZFP36L2P47974 494 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 RGS7P49802 495 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 LILRA4P59901 499 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 CTBP1Q13363 440 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 LAPTM5Q13571 262 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 IRF3Q14653 427 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 BTBD16Q32M84 506 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 LCLAT1Q6UWP7 414 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 TMEM179BQ7Z7N9 219 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 YIPF7Q8N8F6 280 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 LINC01599Q8WXQ3 324 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 TUBGCP3Q96CW5 907 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 CEP19Q96LK0 163 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 C11orf84Q9BUA3 381 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 GORASP2Q9H8Y8 452 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 NDFIP2Q9NV92 336 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 AASSQ9UDR5 926 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 STOML2Q9UJZ1 356 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 PTGDR2Q9Y5Y4 395 aa11.11□□□□□ -0.63
SEMA4D-221ENST00000537934 AKR7A2O43488 359 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 THP07101 528 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 LTA4HP09960 611 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 PTPN3P26045 913 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 CASP2P42575 452 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 ETV1P50549 477 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 CDH13P55290 713 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 SH3BP2P78314 561 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 NKG7Q16617 165 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 ARMCX4Q5H9R4 360 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 RBM20Q5T481 1227 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 KIAA0319Q5VV43 1072 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 LRRC8DQ7L1W4 858 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 MRPL10Q7Z7H8 261 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 ACOT1Q86TX2 421 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 HIPK1Q86Z02 1210 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 RNF135Q8IUD6 432 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 PYROXD2Q8N2H3 581 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 FAM86B1Q8N7N1 296 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 C3orf58Q8NDZ4 430 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 MMP28Q9H239 520 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 TLR6Q9Y2C9 796 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 CDH23Q9H251 3354 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 CCDC182A6NF36 153 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 KCNK1O00180 336 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 NBNO60934 754 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 ZNF623O75123 536 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 VPS4BO75351 444 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 ADORA3P0DMS8 318 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 POU3F3P20264 500 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 MSH3P20585 1137 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 TAF6P49848 677 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 DIO3P55073 304 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 GPNMBQ14956 572 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 UNC50Q53HI1 259 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 SHEQ5VZ18 495 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 ENPP6Q6UWR7 440 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 SLC46A3Q7Z3Q1 461 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 SPATA19Q7Z5L4 167 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 RDH10Q8IZV5 341 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 DNAJC5GQ8N7S2 189 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 OR6B3Q8NGW1 331 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 SLC47A1Q96FL8 570 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 TEX37Q96LM6 180 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 MLPHQ9BV36 600 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 NT5C1AQ9BXI3 368 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 COQ3Q9NZJ6 369 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 POLG2Q9UHN1 485 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 TSPAN16Q9UKR8 245 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 SNX7Q9UNH6 387 aa11.1□□□□□ -0.63
SEMA4D-221ENST00000537934 AZIN1O14977 448 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms