RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 VRK3Q8IV63 474 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 FAM20CQ8IXL6 584 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 GALNT16Q8N428 558 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 DNAJC22Q8N4W6 341 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 RNF10Q8N5U6 811 aaKnown RBP9.32□□□□□ -0.92
CHD4-207ENST00000537634 RBMXL3Q8N7X1 1067 aaKnown RBP9.32□□□□□ -0.92
CHD4-207ENST00000537634 Q8NA96 180 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 CFAP61Q8NHU2 1237 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 GSDMBQ8TAX9 411 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 DENND1AQ8TEH3 1009 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 C1orf54Q8WWF1 131 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 PEX13Q92968 403 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 SLC22A18Q96BI1 424 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 PTERQ96BW5 349 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 ZNF778Q96MU6 729 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 CARD6Q9BX69 1037 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 RAB11FIP5Q9BXF6 653 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 TSGA10Q9BZW7 698 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 CASS4Q9NQ75 786 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 CATSPERZQ9NTU4 200 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 INTS7Q9NVH2 962 aaKnown RBP9.32□□□□□ -0.92
CHD4-207ENST00000537634 P4HTMQ9NXG6 502 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 EURLQ9NYK6 297 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.32□□□□□ -0.92
CHD4-207ENST00000537634 PAK5Q9P286 719 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 CIDEBQ9UHD4 219 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 TCAF1Q9Y4C2 921 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 SPTBN1Q01082 2364 aaKnown RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 SPTAN1Q13813 2472 aaKnown RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 USP9YO00507 2555 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 USP9XQ93008 2570 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 PCM1Q15154 2024 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 ESPL1Q14674 2120 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 A0A1B0GX78 115 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 IQCF5A8MTL0 148 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 GOLGA6L6A8MZA4 724 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 PRMT5O14744 637 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 GPC4O75487 556 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 IPO13O94829 963 aaKnown RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 S1PR4O95977 384 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 CTSBP07858 339 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 PIM1P11309 404 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 ETS1P14921 441 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 CD9P21926 228 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 ALAS2P22557 587 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 TTPAP49638 278 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 ARSFP54793 590 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 SEMA3AQ14563 771 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 MYBPC3Q14896 1274 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 ZC3H12BQ5HYM0 836 aaKnown RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 PTRHD1Q6GMV3 140 aaKnown RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 MRPL14Q6P1L8 145 aaKnown RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 TTC23LQ6PF05 361 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 TTLL10Q6ZVT0 673 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 PPP1R32Q7Z5V6 425 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 PRUNE1Q86TP1 453 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 LDB1Q86U70 411 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 SLC13A5Q86YT5 568 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 MCATQ8IVS2 390 aaKnown RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 IQCKQ8N0W5 287 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 KRT222Q8N1A0 295 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 RAB42Q8N4Z0 105 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 C2orf73Q8N5S3 287 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 OTUD6BQ8N6M0 293 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 LINC01555Q8NAE3 123 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 SPC24Q8NBT2 197 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 OR2L8Q8NGY9 312 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 LKAAEAR1Q8TD35 194 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 SSC4DQ8WTU2 575 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 SKA2Q8WVK7 121 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 TM9SF4Q92544 642 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 FKBP10Q96AY3 582 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 IL17FQ96PD4 163 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 PANX3Q96QZ0 392 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 ILKAPQ9H0C8 392 aaPredicted RBP9.31□□□□□ -0.92
CHD4-207ENST00000537634 SLC39A10Q9ULF5 831 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 GUCA1BQ9UMX6 200 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 B3GNT3Q9Y2A9 372 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 KLHL20Q9Y2M5 609 aa9.31□□□□□ -0.92
CHD4-207ENST00000537634 TCP11X1B4DZS4 312 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 RASGRF2O14827 1237 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 KPNA5O15131 536 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 CD3EAPO15446 510 aaKnown RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 KRT86O43790 486 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 CNOT3O75175 753 aaKnown RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 SEMA7AO75326 666 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 SLCO2B1O94956 709 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 UMODP07911 640 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 ITGA3P26006 1051 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 AOAHP28039 575 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 CDC25BP30305 580 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 SESN2P58004 480 aaPredicted RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 FOXL2P58012 376 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 BASP1P80723 227 aaKnown RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 MRPL49Q13405 166 aaKnown RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 SF1Q15637 639 aaKnown RBP9.3□□□□□ -0.92
CHD4-207ENST00000537634 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 TCTE1Q5JU00 501 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 PCID2Q5JVF3 399 aa9.3□□□□□ -0.92
CHD4-207ENST00000537634 YOD1Q5VVQ6 348 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms