RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ACOT13Q9NPJ3 140 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 DNAJB9Q9UBS3 223 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 RIMKLBQ9ULI2 386 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 TBC1D24Q9ULP9 559 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 COPS3Q9UNS2 423 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 BRCA1P38398 1863 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 FAM92AA1XBS5 289 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 PRRG1O14668 218 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CYP7B1O75881 506 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 ARIH2O95376 493 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 LDOC1O95751 146 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CKBP12277 381 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 GTF2BQ00403 316 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 FSTL4Q6MZW2 842 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 MZT2BQ6NZ67 158 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 C8orf82Q6P1X6 216 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 NPAS4Q8IUM7 802 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 EMID1Q96A84 441 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 LRRC58Q96CX6 371 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 MFSD14AQ96MC6 490 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 MEAF6Q9HAF1 191 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CMTM6Q9NX76 183 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 SPG21Q9NZD8 308 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 H7C4K7 107 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 M0QYV0 167 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 RHOBTB1O94844 696 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 OLFM2O95897 454 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 TRUB2O95900 331 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CD72P21854 359 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 MIPP30301 263 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 SDC4P31431 198 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CD68P34810 354 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CASP2P42575 452 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 PER3P56645 1201 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 KCNK10P57789 538 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 ERVK-8P63133 956 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CRADDP78560 199 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 GRK1Q15835 563 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 STX12Q86Y82 276 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 DEFB123Q8N688 67 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 OR9I1Q8NGQ6 314 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CCDC126Q96EE4 140 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 NXF2Q9GZY0 626 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 SMURF2Q9HAU4 748 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 PDLIM7Q9NR12 457 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 NT5C1B-RDH14C9J2C7 533 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 AXIN1O15169 862 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 APOL3O95236 402 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CXCR4P61073 352 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 PLIN5Q00G26 463 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CREMQ03060 361 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 RASGRP3Q8IV61 690 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 ADHFE1Q8IWW8 467 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 PHOSPHO2Q8TCD6 241 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF431Q8TF32 576 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 SGK3Q96BR1 496 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF669Q96BR6 464 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 SEC22CQ9BRL7 303 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 EXD2Q9NVH0 621 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 NSMCE4AQ9NXX6 385 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 MBD2Q9UBB5 411 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 MAST2Q6P0Q8 1798 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 KPNA5O15131 536 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CST1P01037 141 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 THP07101 528 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 MAGEA12P43365 314 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 NOVP48745 357 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 ISL1P61371 349 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CCDC85BQ15834 202 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 VPS26BQ4G0F5 336 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 ABHD15Q6UXT9 468 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CCDC190Q86UF4 302 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF557Q8N988 423 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 BPIFB1Q8TDL5 484 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC9A6Q92581 669 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CPB2Q96IY4 423 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 SERPINB11Q96P15 392 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 RNF157Q96PX1 679 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 PLCL2Q9UPR0 1127 aa10.65□□□□□ -0.7
CLSTN3-207ENST00000537408 MYADML2A6NDP7 307 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 HOXB3P14651 431 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ZP3P21754 424 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 CPN2P22792 545 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 AZGP1P25311 298 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 TGFBR1P36897 503 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 CSTF3Q12996 717 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 Q3ZCU0 254 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 RRM2BQ7LG56 351 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 GPAT4Q86UL3 456 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 ZNF680Q8NEM1 530 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 KLHDC9Q8NEP7 349 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 TRPV1Q8NER1 839 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 DNAJB14Q8TBM8 379 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 KCNS3Q9BQ31 491 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 POMKQ9H5K3 350 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 TLR9Q9NR96 1032 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 KLK14Q9P0G3 267 aa10.64□□□□□ -0.71
CLSTN3-207ENST00000537408 MFHAS1Q9Y4C4 1052 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms