RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 ERVK-21P61565 698 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 GFOD2Q3B7J2 385 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 ATAT1Q5SQI0 421 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 DGLUCYQ7Z3D6 616 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 FITM2Q8N6M3 262 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 HCAR2Q8TDS4 363 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 POF1BQ8WVV4 589 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 NXPE2Q96DL1 559 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 KREMEN1Q96MU8 473 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 GAL3ST1Q99999 423 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 HEPHQ9BQS7 1158 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 RAB11FIP5Q9BXF6 653 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 CHIAQ9BZP6 476 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 SDCBP2Q9H190 292 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 EHD1Q9H4M9 534 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 NUP50Q9UKX7 468 aa10.45□□□□□ -0.74
CLIP1-209ENST00000537178 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 INSIG1O15503 277 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PVALBP20472 110 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PEX2P28328 305 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 CSTF2P33240 577 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 CDKN2BP42772 138 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 LRRC69Q6ZNQ3 347 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 GHDCQ8N2G8 530 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ZCCHC10Q8TBK6 192 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PCDHGB2Q9Y5G2 931 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 BAZ2BQ9UIF8 2168 aaKnown RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 TTC34A8MYJ7 566 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 EFCAB9A8MZ26 197 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 TMEM150CB9EJG8 249 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ALPPP05187 535 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SRCP12931 536 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 FSHRP23945 695 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 DCKP27707 260 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 CCNFP41002 786 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 AVPR1BP47901 424 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 FAM174BQ3ZCQ3 159 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 VWA5B1Q5TIE3 1220 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SLC24A5Q71RS6 500 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 TDRPQ86YL5 185 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 OR8H3Q8N146 312 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 MPP5Q8N3R9 675 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 KLHL36Q8N4N3 616 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 AKAP1Q92667 903 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF514Q96K75 400 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PCDHB18PQ96TA0 734 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 DUSP26Q9BV47 211 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 LGALS13Q9UHV8 139 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 HEBP2Q9Y5Z4 205 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 MYH4Q9Y623 1939 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ILVBLA1L0T0 632 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PIP5K1BO14986 540 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SLC22A1O15245 554 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SPATA31C1P0DKV0 1188 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ACVR2AP27037 513 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 CLCN4P51793 760 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 NDST2P52849 883 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SLC5A3P53794 718 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SLC13A2Q13183 592 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ASTE1Q2TB18 679 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 TOR1AIP1Q5JTV8 583 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 RBM20Q5T481 1227 aaKnown RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PLPP4Q5VZY2 271 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 OGFOD2Q6N063 350 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PAOXQ6QHF9 649 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 NATD1Q8N6N6 113 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 TMIEQ8NEW7 156 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 BRSK1Q8TDC3 778 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 GPR151Q8TDV0 419 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 HERVK_113Q902F9 699 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 EIF2B4Q9UI10 523 aaKnown RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SPIN1Q9Y657 262 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 C8BP07358 591 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PIK3CBP42338 1070 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 GJA8P48165 433 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 APLP1P51693 650 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 C1QTNF8P60827 252 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SLC35G1Q2M3R5 365 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ALG1LQ6GMV1 187 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 FSTL4Q6MZW2 842 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 RAB11FIP2Q7L804 512 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 RBM23Q86U06 439 aaKnown RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 LDB1Q86U70 411 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 SNIP1Q8TAD8 396 aaKnown RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 TESCQ96BS2 214 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 TAMM41Q96BW9 452 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 JSRP1Q96MG2 331 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 KCTD7Q96MP8 289 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 PTPN18Q99952 460 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ERVK-5Q9HDB9 667 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 ARHGEF4Q9NR80 690 aa10.44□□□□□ -0.74
CLIP1-209ENST00000537178 LYARQ9NX58 379 aaKnown RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 MRPS17Q9Y2R5 130 aaKnown RBP10.44□□□□□ -0.74
CLIP1-209ENST00000537178 C2orf71A6NGG8 1288 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 WASHC1A8K0Z3 465 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 WASH3PC4AMC7 463 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 PSMD9O00233 223 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 H6PDO95479 791 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 PCCBP05166 539 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms