RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CADM2Q8N3J6 435 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 OR8K5Q8NH50 307 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TRAPPC12Q8WVT3 735 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF285Q96NJ3 590 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 FDXACB1Q9BRP7 624 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CENPOQ9BU64 300 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 DUSP21Q9H596 190 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TIGARQ9NQ88 270 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 STARD7Q9NQZ5 370 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 COMMD9Q9P000 198 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ARHGAP28Q9P2N2 729 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 OR12D3Q9UGF7 316 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 KLK4Q9Y5K2 254 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PRORSD1PA6NEY8 169 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PEPDP12955 493 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 GSK3BP49841 420 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CDH12P55289 794 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 B2MP61769 119 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CTF1Q16619 201 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 KCTD20Q7Z5Y7 419 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 GTPBP3Q969Y2 492 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 MED8Q96G25 268 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PDXPQ96GD0 296 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ART5Q96L15 291 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF300Q96RE9 604 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 LPIN3Q9BQK8 851 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 WDR83Q9BRX9 315 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM39BQ9GZU3 492 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM39AQ9NV64 488 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 POLR3BQ9NW08 1133 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ZIM2Q9NZV7 527 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF175Q9Y473 711 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PCDHAC2Q9Y5I4 1007 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 LTBP3Q9NS15 1303 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 A0A1W2PP18 115 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 G3V2L1 256 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 H3BM21 787 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 RLN1P04808 185 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SERPINF2P08697 491 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PIRTP0C851 137 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 MYL9P24844 172 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CLCQ05315 142 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 EFEMP1Q12805 493 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SLC35F1Q5T1Q4 408 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 METTL2BQ6P1Q9 378 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF567Q8N184 647 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 PELI3Q8N2H9 469 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 NKAPQ8N5F7 415 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TFAP2BQ92481 460 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 FKBP10Q96AY3 582 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 HBEGFQ99075 208 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TTLL2Q9BWV7 592 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 B3GNT5Q9BYG0 378 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 RANBP3Q9H6Z4 567 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 BPIFA1Q9NP55 256 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SLC28A1O00337 649 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SLC1A7O00341 560 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SDHDO14521 159 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 HCN1O60741 890 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CYP2A7P20853 494 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CD247P20963 164 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CFL1P23528 166 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 IFITM2Q01629 132 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ACSM2AQ08AH3 577 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ACSM2BQ68CK6 577 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SLC51AQ86UW1 340 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ZDHHC21Q8IVQ6 265 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 IL31RAQ8NI17 732 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 SLC7A6Q92536 515 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 WNT8BQ93098 351 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 KCNC2Q96PR1 638 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TM9SF2Q99805 663 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 MIEF1Q9NQG6 463 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ACOXLQ9NUZ1 547 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 NCKAP1Q9Y2A7 1128 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CCL15-CCL14A0A0B4J2E2 113 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 KRBOX1C9JBD0 128 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 DLX3O60479 287 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ERN1O75460 977 aaKnown RBP5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ALPLP05186 524 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 NR2F6P10588 404 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 AP1S2P56377 157 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 OGDHQ02218 1023 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 CCL15Q16663 113 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 XAF1Q6GPH4 301 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 DESI1Q6ICB0 168 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 B3GNT9Q6UX72 402 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 C12orf29Q8N999 325 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 KDM1BQ8NB78 822 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 OR10Q1Q8NGQ4 319 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ANKRD49Q8WVL7 239 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 TANKQ92844 425 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 LRRC58Q96CX6 371 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ULBP1Q9BZM6 244 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 ELP3Q9H9T3 547 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 DNAJC11Q9NVH1 559 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 OSGIN1Q9UJX0 560 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 EDARQ9UNE0 448 aa5.29□□□□□ -1.56
PTPRD-213ENST00000537002 YDJCA8MPS7 323 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 STX16O14662 325 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms