RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ZNF578Q96N58 590 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CTRCQ99895 268 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 KLHL25Q9H0H3 589 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TSPYL1Q9H0U9 437 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ACSS3Q9H6R3 686 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 C1GALT1Q9NS00 363 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 AKAP7Q9P0M2 348 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TXNDC16Q9P2K2 825 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC39A10Q9ULF5 831 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PDE10AQ9Y233 779 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 B3GALT1Q9Y5Z6 326 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC9B1P1A6NJY1 282 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 NVLO15381 856 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PHGDHO43175 533 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC16A8O95907 504 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CATP04040 527 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 EBLN1P0CF75 366 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CDH3P22223 829 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TNFRSF8P28908 595 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RGS4P49798 205 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 IL2P60568 153 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 POU4F1Q01851 419 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 KIR2DS3Q14952 304 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ZKSCAN8Q15776 578 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CYP2A13Q16696 494 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 GRTP1Q5TC63 336 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 LRRC8EQ6NSJ5 796 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TTC23LQ6PF05 361 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MBOAT1Q6ZNC8 495 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 UBE2R2Q712K3 238 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 KMT5CQ86Y97 462 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CARFQ8N187 725 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MYO1HQ8N1T3 1032 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 D2HGDHQ8N465 521 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 EIF1ADQ8N9N8 165 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SNIP1Q8TAD8 396 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MAGEC3Q8TD91 643 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FGF11Q92914 225 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MRRFQ96E11 262 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RNF31Q96EP0 1072 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PDLIM5Q96HC4 596 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TRAPPC9Q96Q05 1148 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 OR6C1Q96RD1 312 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TAAR9Q96RI9 348 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RAB11FIP5Q9BXF6 653 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 EPB41L4BQ9H329 900 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FBXO8Q9NRD0 319 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 THSD1Q9NS62 852 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC39A1Q9NY26 324 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SPATA7Q9P0W8 599 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ZMIZ1Q9ULJ6 1067 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 BTRCQ9Y297 605 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RAXQ9Y2V3 346 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PCDHGA7Q9Y5G6 932 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PCDHGA3Q9Y5H0 932 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CEP295Q9C0D2 2601 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 HEATR5BQ9P2D3 2071 aa10.93□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CHD8Q9HCK8 2581 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ISM1B1AKI9 464 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RIPK2O43353 540 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 HCRTR1O43613 425 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 KDM1AO60341 852 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TIAF1O95411 115 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ZBTB11O95625 1053 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 C8GP07360 202 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 IMPA1P29218 277 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PHBP35232 272 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SPRP35270 261 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CSRP3P50461 194 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PMS2P54278 862 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 YBX1P67809 324 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 HSD11B2P80365 405 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SP140Q13342 867 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 BMPR2Q13873 1038 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 USP10Q14694 798 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLMAPQ14BN4 828 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 GPR19Q15760 415 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC5A12Q1EHB4 618 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ZXDCQ2QGD7 858 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SUSD1Q6UWL2 747 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SBSNQ6UWP8 590 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CMC1Q7Z7K0 106 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 LRRC56Q8IYG6 542 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PPFIBP2Q8ND30 876 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ZNF480Q8WV37 535 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC44A1Q8WWI5 657 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CYTH2Q99418 400 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 DDA1Q9BW61 102 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC12A9Q9BXP2 914 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SPRY4Q9C004 299 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 UNKQ9C0B0 810 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 POPDC3Q9HBV1 291 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FAM60AQ9NP50 221 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ACSL6Q9UKU0 697 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 KLHL20Q9Y2M5 609 aa10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MAP1BP46821 2468 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SPTBP11277 2137 aa10.91□□□□□ -0.66
TNFRSF1A-208ENST00000536194 APC2O95996 2303 aa10.91□□□□□ -0.66
TNFRSF1A-208ENST00000536194 IGF2RP11717 2491 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms