RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LYSMD2Q8IV50 215 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 PIK3C3Q8NEB9 887 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 OR7A2PQ8NGA2 310 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 SLC22A17Q8WUG5 538 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 MUL1Q969V5 352 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 EIF3LQ9Y262 564 aaKnown RBP17.55■□□□□ 0.4
RAB40C-203ENST00000535977 PCDHB9Q9Y5E1 797 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 BPTFQ12830 3046 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.54■□□□□ 0.4
RAB40C-203ENST00000535977 SEC24AO95486 1093 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 SEPHS1P49903 392 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 CRY1Q16526 586 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 PTRHD1Q6GMV3 140 aaKnown RBP17.54■□□□□ 0.4
RAB40C-203ENST00000535977 BEND7Q8N7W2 519 aaPredicted RBP17.54■□□□□ 0.4
RAB40C-203ENST00000535977 CDYL2Q8N8U2 506 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 POC5Q8NA72 575 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 DCAF4L2Q8NA75 395 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 METTL6Q8TCB7 284 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 RPL10LQ96L21 214 aaKnown RBP17.54■□□□□ 0.4
RAB40C-203ENST00000535977 DACH2Q96NX9 599 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 SARS2Q9NP81 518 aaKnown RBP17.54■□□□□ 0.4
RAB40C-203ENST00000535977 MFN2O95140 757 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 PGLSO95336 258 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 NTRK1P04629 796 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 RPL17P18621 184 aaKnown RBP17.54■□□□□ 0.4
RAB40C-203ENST00000535977 GP2P55259 537 aaKnown RBP17.54■□□□□ 0.4
RAB40C-203ENST00000535977 ERVPABLB-1P60509 514 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 FXNQ16595 210 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 CYP51A1Q16850 503 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 DGUOKQ16854 277 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 ADPRMQ3LIE5 342 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 FAM219BQ5XKK7 198 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 LINGO4Q6UY18 593 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 RNF165Q6ZSG1 346 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 METTL3Q86U44 580 aaKnown RBP17.54■□□□□ 0.4
RAB40C-203ENST00000535977 LACC1Q8IV20 430 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 RBFAQ8N0V3 343 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 NATD1Q8N6N6 113 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 DNAJC5GQ8N7S2 189 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 OR2T11Q8NH01 316 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 DNAJB14Q8TBM8 379 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 IGSF21Q96ID5 467 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 LRRC3Q9BY71 257 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 ANAPC2Q9UJX6 822 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 OR51B4Q9Y5P0 310 aa17.54■□□□□ 0.4
RAB40C-203ENST00000535977 H0YAE9 185 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 MT-ND1P03886 318 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 INHAP05111 366 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 DGKAP23743 735 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 RFC2P35250 354 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 EIF2DP41214 584 aaKnown RBP17.53■□□□□ 0.4
RAB40C-203ENST00000535977 CSNK1DP48730 415 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 PPP5CP53041 499 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 IMPG1Q17R60 797 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 SNAP47Q5SQN1 464 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 DESI1Q6ICB0 168 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 Q6ZSR9 355 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 AADATQ8N5Z0 425 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 PROKR1Q8TCW9 393 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 MYO19Q96H55 970 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 SMIM14Q96QK8 99 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 CFHR5Q9BXR6 569 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 YIPF1Q9Y548 306 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 DNAH12Q6ZR08 3092 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 ASPDHA6ND91 283 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 AREL1O15033 823 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 UPK1BO75841 260 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 GLUD1P00367 558 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 TUBA1BP68363 451 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 GTF2H2Q13888 395 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 FBXO48Q5FWF7 155 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 PAGE3Q5JUK9 113 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 RETSATQ6NUM9 610 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 GTF2H2CQ6P1K8 395 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 TUBA1AQ71U36 451 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 FKBP9P1Q75LS8 142 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 ATL1Q8WXF7 558 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 TEX37Q96LM6 180 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 PPP3R2Q96LZ3 170 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 ACOX2Q99424 681 aa17.53■□□□□ 0.4
RAB40C-203ENST00000535977 FAM126AQ9BYI3 521 aaPredicted RBP17.53■□□□□ 0.4
RAB40C-203ENST00000535977 INPP4BO15327 924 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 MAN1A2O60476 641 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 MAGP20916 626 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 SMAD3P84022 425 aaKnown RBP17.52■□□□□ 0.4
RAB40C-203ENST00000535977 GALK2Q01415 458 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 MAD2L1Q13257 205 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-203ENST00000535977 OTUD3Q5T2D3 398 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-203ENST00000535977 ZCCHC8Q6NZY4 707 aaKnown RBP17.52■□□□□ 0.4
RAB40C-203ENST00000535977 GOLGA7Q7Z5G4 137 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 SNX20Q7Z614 316 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 SLAIN1Q8ND83 568 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 CD99L2Q8TCZ2 262 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 PIH1D2Q8WWB5 315 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 GLMNQ92990 594 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 C2orf49Q9BVC5 232 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-203ENST00000535977 BTBD2Q9BX70 525 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 IRF2BPLQ9H1B7 796 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 OARD1Q9Y530 152 aa17.52■□□□□ 0.4
RAB40C-203ENST00000535977 TCRBV5S2A0A599 114 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms