RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 AMACRQ9UHK6 382 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 AMDHD2Q9Y303 409 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 MRPL11Q9Y3B7 192 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 SPAG17Q6Q759 2223 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 OTOGLQ3ZCN5 2332 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 WDR19Q8NEZ3 1342 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CNOT1A5YKK6 2376 aaKnown RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SPTBN2O15020 2390 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 KIAA1671Q9BY89 1806 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 A0A1B0GVT2 93 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 hDV102S1A0JD36 115 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CPED1A4D0V7 1026 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 EME2A4GXA9 379 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 TSPY2A6NKD2 308 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 C2CD4DB7Z1M9 353 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 I6L893 689 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 PI15O43692 258 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 TSPAN1O60635 241 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 MITFO75030 526 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 AVILO75366 819 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CXCL14O95715 111 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 EGFP01133 1207 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 RETP07949 1114 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SCG2P13521 617 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 IL7RP16871 459 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 TNFRSF1BP20333 461 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 BDNFP23560 247 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 LMO1P25800 156 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 GCH1P30793 250 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 UBA7P41226 1012 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 TDO2P48775 406 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CTSCP53634 463 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 LIMK1P53667 647 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 TUBA1BP68363 451 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 NUCB1Q02818 461 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 LTBQ06643 244 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ARHGAP1Q07960 439 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 OASLQ15646 514 aaKnown RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 DECR1Q16698 335 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SYT16Q17RD7 645 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ACCSLQ4AC99 568 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF805Q5CZA5 627 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CELF3Q5SZQ8 465 aaKnown RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 GPATCH4Q5T3I0 446 aaKnown RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 IRAK1BP1Q5VVH5 260 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 KRT79Q5XKE5 535 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SLC24A5Q71RS6 500 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ADGRD2Q7Z7M1 963 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 TSPAN33Q86UF1 283 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CCDC190Q86UF4 302 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 NOXA1Q86UR1 476 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SFR1Q86XK3 245 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CCDC13Q8IYE1 715 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CLIP4Q8N3C7 705 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 DCLK2Q8N568 766 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 WDTC1Q8N5D0 677 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 MRPL43Q8N983 215 aaKnown RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SYT2Q8N9I0 419 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 AVL9Q8NBF6 648 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 VN1R2Q8NFZ6 395 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 OR1J2Q8NGS2 313 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 GSDMBQ8TAX9 411 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 PRPF31Q8WWY3 499 aaKnown RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 IGSF8Q969P0 613 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ERGIC1Q969X5 290 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ORAI1Q96D31 301 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SPATA33Q96N06 139 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SEMA3CQ99985 751 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 NEURL2Q9BR09 285 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ZPBPQ9BS86 351 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 MMP27Q9H306 513 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 HRH4Q9H3N8 390 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 PLK3Q9H4B4 646 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 C6orf106Q9H6K1 298 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 POLR1BQ9H9Y6 1135 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 UBTD1Q9HAC8 227 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SCPEP1Q9HB40 452 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ACSS1Q9NUB1 689 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 PAG1Q9NWQ8 432 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 NKIRAS2Q9NYR9 191 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SPG21Q9NZD8 308 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 FBXL17Q9UF56 701 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 CHORDC1Q9UHD1 332 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 SIX4Q9UIU6 781 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 FBXL2Q9UKC9 423 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 STX8Q9UNK0 236 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 INSL5Q9Y5Q6 135 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 R4GN57 208 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 DNAH14Q0VDD8 3507 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 GREB1Q4ZG55 1949 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 GREB1LQ9C091 1923 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-202ENST00000535689 NBEAQ8NFP9 2946 aa3.22□□□□□ -1.89
SNHG1-202ENST00000535689 ABCB11O95342 1321 aa3.21□□□□□ -1.89
SNHG1-202ENST00000535689 LCTP09848 1927 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 NCOR2Q9Y618 2525 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 IGKV6D-41A0A0C4DH26 115 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 MAGEA13PA6NCF6 341 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 VCYO14598 125 aa3.21□□□□□ -1.9
SNHG1-202ENST00000535689 PLRG1O43660 514 aaKnown RBP3.21□□□□□ -1.9
SNHG1-202ENST00000535689 HMMRO75330 724 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms