RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 LRTOMTQ8WZ04 291 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 FCRL5Q96RD9 977 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 ZSCAN5AQ9BUG6 496 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 MARCH7Q9H992 704 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 NOX1Q9Y5S8 564 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 AIREO43918 545 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 TBX18O95935 607 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 ADAM8P78325 824 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 SP140Q13342 867 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 SCARB2Q14108 478 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 EOGTQ5NDL2 527 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 PRAMEF14Q5SWL7 426 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 PRAMEF13Q5VWM6 474 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 OR13C4Q8NGS5 318 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 GAL3ST1Q99999 423 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 TMEM175Q9BSA9 504 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 ZCCHC3Q9NUD5 404 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 TAS2R7Q9NYW3 318 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 VSTM5A8MXK1 200 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 NFATC2Q13469 925 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CA9Q16790 459 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 LRRTM4Q86VH4 590 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CAMKVQ8NCB2 501 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CCM2Q9BSQ5 444 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 EFCAB11Q9BUY7 163 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 MED28Q9H204 178 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 GKN1Q9NS71 199 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 MYCLP1P12525 358 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 KCNJ5P48544 419 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 SOWAHAQ2M3V2 549 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CLEC20AQ6ZU45 233 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 P2RY8Q86VZ1 359 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CYB5D2Q8WUJ1 264 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CAMK1GQ96NX5 476 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CTPS2Q9NRF8 586 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CPNE3O75131 537 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 APOC1P02654 83 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 RB1P06400 928 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 ARCN1P48444 511 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 FAM46DQ8NEK8 389 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 HPS1Q92902 700 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 NODALQ96S42 347 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 KXD1Q9BQD3 176 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 ITGB1BP2Q9UKP3 347 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 FKBP7Q9Y680 259 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 A0A0J9YVX5 310 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 CEBPGP53567 150 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 OXR1Q8N573 874 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 AVL9Q8NBF6 648 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 NDC1Q9BTX1 674 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 TMLHEQ9NVH6 421 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 EDDM13A0A1B0GTR0 161 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 FAM234BA2RU67 622 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 RNF225M0QZC1 329 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 OR1I1O60431 355 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 HCAR3P49019 387 aa17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.8■□□□□ 0.442e-6■■■■□ 20.7
SFSWAP-203ENST00000535236 DNAJA4Q8WW22 397 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-203ENST00000535236 ILVBLA1L0T0 632 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 UGT1A9O60656 530 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 SYN1P17600 705 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 UGT1A6P19224 532 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 UGT1A1P22309 533 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 UGT1A4P22310 534 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 ECHS1P30084 290 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 UGT1A3P35503 534 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 CHRNA4P43681 627 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 SEPHS1P49903 392 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 NRLP54845 237 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 MTPNP58546 118 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 SCN1BQ07699 218 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 ARMC10Q8N2F6 343 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 GHDCQ8N2G8 530 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 UGT1A7Q9HAW7 530 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 UGT1A10Q9HAW8 530 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 UGT1A8Q9HAW9 530 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 NDUFS4O43181 175 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 LCA5LO95447 670 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 AP1S2P56377 157 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 CRTC2Q53ET0 693 aaPredicted RBP17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 BRAT1Q6PJG6 821 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 RNF19BQ6ZMZ0 732 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 GRHL3Q8TE85 626 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 ARMC5Q96C12 935 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 GDAP2Q9NXN4 497 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 NOCTQ9UK39 431 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 ALPIP09923 528 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 FCHO2Q0JRZ9 810 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 DPYSL2Q16555 572 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 LNX2Q8N448 690 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 NTAN1Q96AB6 310 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 CYP2S1Q96SQ9 504 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 YIPF4Q9BSR8 244 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 BTBD1Q9H0C5 482 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 AGR2O95994 175 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 TGFB1P01137 390 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 LINGO3P0C6S8 592 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 VIPR1P32241 457 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 PDE12Q6L8Q7 609 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms