RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ZNF605Q86T29 641 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 SERPINA9Q86WD7 417 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 CCDC117Q8IWD4 279 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-232ENST00000535094 RNF175Q8N4F7 328 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 MUL1Q969V5 352 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 Q96MT0 163 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 GIMAP4Q9NUV9 329 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 ARIH1Q9Y4X5 557 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-232ENST00000535094 GNG14A0A1W2PPG7 69 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 E2F3O00716 465 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 WDR47O94967 919 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 ITGALP20701 1170 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 ALDH7A1P49419 539 aaKnown RBP15.54■□□□□ 0.08
MCF2L-232ENST00000535094 MXD1Q05195 221 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 SF1Q15637 639 aaKnown RBP15.54■□□□□ 0.08
MCF2L-232ENST00000535094 ZNF404Q494X3 552 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 TPRG1LQ5T0D9 272 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 USP51Q70EK9 711 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 CEP68Q76N32 757 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 ZNF280BQ86YH2 543 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 CD200R1Q8TD46 325 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 GTF2H4Q92759 462 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 MYEOVQ96EZ4 313 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 DEPDC7Q96QD5 511 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 DOK1Q99704 481 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 ZNF556Q9HAH1 456 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.54■□□□□ 0.08
MCF2L-232ENST00000535094 TMEM248Q9NWD8 314 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 SPATA7Q9P0W8 599 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 RAPGEFL1Q9UHV5 662 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 NINQ8N4C6 2090 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 FAM92AA1XBS5 289 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 STX16O14662 325 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 FABP3P05413 133 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 IFITM3Q01628 133 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 DPY19L1Q2PZI1 675 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 ZNF641Q96N77 438 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-232ENST00000535094 MTERF1Q99551 399 aaKnown RBP15.54■□□□□ 0.08
MCF2L-232ENST00000535094 ALOXE3Q9BYJ1 711 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 RNF167Q9H6Y7 350 aa15.54■□□□□ 0.08
MCF2L-232ENST00000535094 TRIP12Q14669 1992 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-232ENST00000535094 HTR1AP08908 422 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 CRATP43155 626 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 ISL1P61371 349 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 PHKG1Q16816 387 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 UAP1L1Q3KQV9 507 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 USP39Q53GS9 565 aaKnown RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 FAM83FQ8NEG4 500 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 BEX2Q9BXY8 128 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 ANK1P16157 1881 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 AXIN1O15169 862 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 STK16O75716 305 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 BCKDHAP12694 445 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 PRIM2P49643 509 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 TAF1AQ15573 450 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 INO80DQ53TQ3 878 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 BEND5Q7L4P6 421 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 GTPBP3Q969Y2 492 aaKnown RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 MED8Q96G25 268 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 CSNK1G1Q9HCP0 422 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 ERVK13-1Q9NX77 482 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 NUDT4Q9NZJ9 180 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 ITGB1BP2Q9UKP3 347 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 DYTNA2CJ06 578 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 ANKRD66B4E2M5 251 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 IFRD1O00458 451 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 FPGTO14772 594 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 PRAMEF11O60813 436 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 IL6P05231 212 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 INHBBP09529 407 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 S100A1P23297 94 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 GADD45AP24522 165 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 CD40LGP29965 261 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 SOAT1P35610 550 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 KIR3DL1P43629 444 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 CSRP3P50461 194 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 HUNKP57058 714 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 RPP38P78345 283 aaKnown RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 ZNF648Q5T619 568 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 GTF2IRD2BQ6EKJ0 949 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 GTF2IRD2Q86UP8 949 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 ATL1Q8WXF7 558 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 NLE1Q9NVX2 485 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-232ENST00000535094 IL37Q9NZH6 218 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 TMED5Q9Y3A6 229 aa15.53■□□□□ 0.08
MCF2L-232ENST00000535094 RGPD3A6NKT7 1758 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-232ENST00000535094 RGPD4Q7Z3J3 1758 aa15.52■□□□□ 0.08
MCF2L-232ENST00000535094 LOC285095A0A1B0GVY8 99 aa15.52■□□□□ 0.08
MCF2L-232ENST00000535094 SLC28A1O00337 649 aa15.52■□□□□ 0.08
MCF2L-232ENST00000535094 SOX6P35712 828 aa15.52■□□□□ 0.08
MCF2L-232ENST00000535094 OR1E2P47887 323 aa15.52■□□□□ 0.08
MCF2L-232ENST00000535094 CSTF3Q12996 717 aaKnown RBP15.52■□□□□ 0.08
MCF2L-232ENST00000535094 BTG3Q14201 252 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-232ENST00000535094 CTF1Q16619 201 aa15.52■□□□□ 0.08
MCF2L-232ENST00000535094 HIST2H2ACQ16777 129 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-232ENST00000535094 CCBE1Q6UXH8 406 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-232ENST00000535094 ZNF548Q8NEK5 533 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-232ENST00000535094 SPASTQ9UBP0 616 aa15.52■□□□□ 0.08
MCF2L-232ENST00000535094 SLCO3A1Q9UIG8 710 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms