RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 NCF1CA8MVU1 366 aaPredicted RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 UPK3BL1B0FP48 263 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 UPK3BL2E5RIL1 263 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 GFYI3L273 518 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 ANKRD28O15084 1053 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 LSM1O15116 133 aaKnown RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 UGDHO60701 494 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 STK16O75716 305 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 RNASEH2AO75792 299 aaKnown RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 TRIM16O95361 564 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 KRT6AP02538 564 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 KRT6BP04259 564 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 NCF1P14598 390 aaPredicted RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 TYRP14679 529 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 EPB42P16452 691 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 IL10P22301 178 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 LHCGRP22888 699 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 CA8P35219 290 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 CTSOP43234 321 aaPredicted RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 KRT6CP48668 564 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 CCR3P51677 355 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 DIO3P55073 304 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 FOLH1Q04609 750 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 PCDH1Q08174 1060 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 BOP1Q14137 746 aaKnown RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 PTPRRQ15256 657 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 TEAD2Q15562 447 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 VPS26BQ4G0F5 336 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 TSPAN33Q86UF1 283 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 TMEM25Q86YD3 366 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 HID1Q8IV36 788 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 ST13P4Q8IZP2 240 aaPredicted RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 LILRA2Q8N149 483 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 SFRP1Q8N474 314 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 TRAM1L1Q8N609 369 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 ZNF513Q8N8E2 541 aaPredicted RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 CDYL2Q8N8U2 506 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 FNDC5Q8NAU1 212 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 PAPD5Q8NDF8 572 aaKnown RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 DDHD1Q8NEL9 900 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 OR52B6Q8NGF0 335 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 OR2A12Q8NGT7 310 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 OR6K2Q8NGY2 324 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 OR2T11Q8NH01 316 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 PROKR1Q8TCW9 393 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 LKAAEAR1Q8TD35 194 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 UCMAQ8WVF2 138 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 NELL1Q92832 810 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 ATP6V1E2Q96A05 226 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 VPS35Q96QK1 796 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 ZBTB18Q99592 522 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 EGFL8Q99944 293 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 PKP2Q99959 881 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 TMEM79Q9BSE2 394 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 ZSCAN5AQ9BUG6 496 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 EPB41L1Q9H4G0 881 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 COPS7BQ9H9Q2 264 aaPredicted RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 PARVBQ9HBI1 364 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 NDUFA13Q9P0J0 144 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 EIF3LQ9Y262 564 aaKnown RBP9.44□□□□□ -0.9
CHKA-207ENST00000533728 SLC27A6Q9Y2P4 619 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 NEUROG3Q9Y4Z2 214 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 SNX13Q9Y5W8 968 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 PTGDR2Q9Y5Y4 395 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 CACNA1EQ15878 2313 aa9.44□□□□□ -0.9
CHKA-207ENST00000533728 PCM1Q15154 2024 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 NEDD8-MDP1E9PL57 170 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 SCAMP3O14828 347 aaKnown RBP9.43□□□□□ -0.9
CHKA-207ENST00000533728 HOXC11O43248 304 aaPredicted RBP9.43□□□□□ -0.9
CHKA-207ENST00000533728 NARSO43776 548 aaKnown RBP9.43□□□□□ -0.9
CHKA-207ENST00000533728 CLDN9O95484 217 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 FTH1P02794 183 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 UGT2B4P06133 528 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 GSTM1P09488 218 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 ATP1B2P14415 290 aaPredicted RBP9.43□□□□□ -0.9
CHKA-207ENST00000533728 ARSAP15289 507 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 EPCAMP16422 314 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 GJA1P17302 382 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 UGT1A6P19224 532 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 CYP2A7P20853 494 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 UGT1A1P22309 533 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 UGT1A4P22310 534 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 GKP32189 559 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 CA5AP35218 305 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 UGT1A3P35503 534 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 UGT1A5P35504 534 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 GNPDA1P46926 289 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 HSPA7P48741 367 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 STK19P49842 368 aaPredicted RBP9.43□□□□□ -0.9
CHKA-207ENST00000533728 CHN2P52757 468 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 UFM1P61960 85 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 GSTM4Q03013 218 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 NFYCQ13952 458 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 PHKG1Q16816 387 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 AP5B1Q2VPB7 878 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 ATP13A5Q4VNC0 1218 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 LDLRAP1Q5SW96 308 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 INTS11Q5TA45 600 aaKnown RBP9.43□□□□□ -0.9
CHKA-207ENST00000533728 STPG1Q5TH74 334 aa9.43□□□□□ -0.9
CHKA-207ENST00000533728 PPP4R4Q6NUP7 873 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms