RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MPC1LP0DKB6 136 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 AK4P27144 223 aaPredicted RBP18■□□□□ 0.47
SMPD1-208ENST00000533123 CNR2P34972 360 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 PI4KAP42356 2102 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 DMPKQ09013 629 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 PRAMEF14Q5SWL7 426 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 MBOAT1Q6ZNC8 495 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 AFAP1L2Q8N4X5 818 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 DCBLD1Q8N8Z6 715 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 CCDC28BQ9BUN5 200 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 DPEP2Q9H4A9 486 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 TAS2R1Q9NYW7 299 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 DNAJC15Q9Y5T4 150 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 LRP4O75096 1905 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 ZNF318Q5VUA4 2279 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 ZFC3H1O60293 1989 aaKnown RBP17.99■□□□□ 0.47
SMPD1-208ENST00000533123 A8MUI8 341 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 PLOD1Q02809 727 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-208ENST00000533123 NEK10Q6ZWH5 1172 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 SYVN1Q86TM6 617 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 ASB11Q8WXH4 323 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 ZC3H10Q96K80 434 aaKnown RBP17.99■□□□□ 0.47
SMPD1-208ENST00000533123 BTBD10Q9BSF8 475 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 OR52A5Q9H2C5 316 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 ZNF225Q9UK10 706 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 TMCO1Q9UM00 188 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 CACNA1EQ15878 2313 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 CACNA1HO95180 2353 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 ATP6AP2A0A1C7CYW4 349 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 KLHL33A6NCF5 533 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 B2RBV5 119 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 AZIN1O14977 448 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 VILLO15195 856 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 ATP6AP2O75787 350 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 MATN4O95460 622 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 S100BP04271 92 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-208ENST00000533123 SIM2Q14190 667 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-208ENST00000533123 RBBP7Q16576 425 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 KANK2Q63ZY3 851 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 UBE2R2Q712K3 238 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-208ENST00000533123 CLYBLQ8N0X4 340 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 PDPRQ8NCN5 879 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 STON2Q8WXE9 905 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 C3orf30Q96M34 536 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 HGH1Q9BTY7 390 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 TRNAU1APQ9NX07 287 aaKnown RBP17.99■□□□□ 0.47
SMPD1-208ENST00000533123 WDR37Q9Y2I8 494 aa17.99■□□□□ 0.47
SMPD1-208ENST00000533123 PRR33A8MZF0 331 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 GYG2O15488 501 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 TAPBPO15533 448 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 CLCNKAP51800 687 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 INHBCP55103 352 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 NXPH1P58417 271 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 KLF10Q13118 480 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 RPA4Q13156 261 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 SLC30A9Q6PML9 568 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 PRR23BQ6ZRT6 265 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 PHACTR4Q8IZ21 702 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 TEX9Q8N6V9 391 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 PIGKQ92643 395 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 C19orf60Q96EN9 201 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 EGFL8Q99944 293 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 CADM1Q9BY67 442 aaKnown RBP17.98■□□□□ 0.47
SMPD1-208ENST00000533123 ZNF385DQ9H6B1 395 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 BAIAP2L1Q9UHR4 511 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 PILRBQ9UKJ0 227 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 ACSL5Q9ULC5 683 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 CFAP20Q9Y6A4 193 aaKnown RBP17.98■□□□□ 0.47
SMPD1-208ENST00000533123 KRT87PA6NCN2 255 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 PRR19A6NJB7 356 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 GFYI3L273 518 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 KCNJ13O60928 360 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 JUNDP17535 347 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 HSPA7P48741 367 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 C21orf59P57076 290 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 RIPK1Q13546 671 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 LRP8Q14114 963 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 LPAL2Q16609 132 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 RBM15BQ8NDT2 890 aaKnown RBP17.98■□□□□ 0.47
SMPD1-208ENST00000533123 OR52B6Q8NGF0 335 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 TWIST2Q8WVJ9 160 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 MIEF2Q96C03 454 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 CDK15Q96Q40 435 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 TUBB1Q9H4B7 451 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 PRDM8Q9NQV8 689 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 TIMM22Q9Y584 194 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 PCDHGA2Q9Y5H1 932 aa17.98■□□□□ 0.47
SMPD1-208ENST00000533123 ARHGEF17Q96PE2 2063 aaPredicted RBP17.98■□□□□ 0.47
SMPD1-208ENST00000533123 LOC100653049A0A140TA62 436 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 A0A1B0GVT2 93 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 GALR2O43603 387 aaPredicted RBP17.97■□□□□ 0.47
SMPD1-208ENST00000533123 KRT34O76011 436 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 CELA2BP08218 269 aaPredicted RBP17.97■□□□□ 0.47
SMPD1-208ENST00000533123 FGF4P08620 206 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 GNSP15586 552 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 IDSP22304 550 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 ACADLP28330 430 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 ACTR1BP42025 376 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 ACTR1AP61163 376 aa17.97■□□□□ 0.47
SMPD1-208ENST00000533123 C1orf61Q13536 156 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms