RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 CCDC189A1A4V9 331 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 GSAPA4D1B5 854 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 NPEPPSL1A6NEC2 478 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ISM1B1AKI9 464 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 TOX3O15405 576 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 CSO75390 466 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 GUCA1CO95843 209 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 SLC16A8O95907 504 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 C9P02748 559 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 CHRM5P08912 532 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 PRDX3P30048 256 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 PKLRP30613 574 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 CSF2RBP32927 897 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 PNLIPRP1P54315 467 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 IRF9Q00978 393 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZFP36L1Q07352 338 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 FOXC1Q12948 553 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 TARDBPQ13148 414 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 TRA2AQ13595 282 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 KIR2DS3Q14952 304 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ACAP2Q15057 778 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 TSNQ15631 228 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 PHKG1Q16816 387 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ISXQ2M1V0 245 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 SNAP47Q5SQN1 464 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 PHF19Q5T6S3 580 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 SBSNQ6UWP8 590 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 FAM92BQ6ZTR7 304 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 TMPRSS9Q7Z410 1059 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 CROCCP2Q86T23 111 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ISCA2Q86U28 154 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 GPSM1Q86YR5 675 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 SYTL1Q8IYJ3 562 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 CYP4X1Q8N118 509 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 DCBLD1Q8N8Z6 715 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 HMGCLL1Q8TB92 370 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ACMSDQ8TDX5 336 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZNF480Q8WV37 535 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 KCTD4Q8WVF5 259 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ATL1Q8WXF7 558 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 KIAA1191Q96A73 305 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 IL17FQ96PD4 163 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 RUFY1Q96T51 708 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 CD180Q99467 661 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 STRADBQ9C0K7 418 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 SEMA6CQ9H3T2 930 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 IGSF5Q9NSI5 407 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 FAM53CQ9NYF3 392 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 UTP6Q9NYH9 597 aaKnown RBP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 ACTR10Q9NZ32 417 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 AKAP7Q9P0M2 348 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 KLHL3Q9UH77 587 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 IKZF3Q9UKT9 509 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 RNF112Q9ULX5 631 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 OARD1Q9Y530 152 aa10.88□□□□□ -0.67
TRAPPC4-211ENST00000533012 A0A1W2PPM1 405 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 KRT87PA6NCN2 255 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 A8MU76 341 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 E7ENX8 843 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 MAP2K7O14733 419 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 RASSF9O75901 435 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 ANXA5P08758 320 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 RBP1P09455 135 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 PYGBP11216 843 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 ERGP11308 486 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 TFEBP19484 476 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 CCKBRP32239 447 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 GMPRP36959 345 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 GFERP55789 205 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 CLDN6P56747 220 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 CDKL1Q00532 357 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 TAP2Q03519 686 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 DLG1Q12959 904 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 TGFBIQ15582 683 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 OR4D1Q15615 310 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 SF1Q15637 639 aaKnown RBP10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 PPP1R3AQ16821 1122 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 TSNAXIP1Q2TAA8 658 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 CACHD1Q5VU97 1274 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 AGTRAPQ6RW13 159 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 LRIG3Q6UXM1 1119 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 LCA5Q86VQ0 697 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 SLITRK4Q8IW52 837 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 CENPLQ8N0S6 344 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 PLD6Q8N2A8 252 aaKnown RBP10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 LINC01555Q8NAE3 123 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 RHEBL1Q8TAI7 183 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 DENND1AQ8TEH3 1009 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 MZB1Q8WU39 189 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 SMPDL3AQ92484 453 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 PTERQ96BW5 349 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 EGFL8Q99944 293 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 ALG9Q9H6U8 611 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 C1GALT1Q9NS00 363 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZNF446Q9NWS9 450 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 SPHK1Q9NYA1 384 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 EURLQ9NYK6 297 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 TMEM9Q9P0T7 183 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 STOX2Q9P2F5 926 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 DCDC2Q9UHG0 476 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms