RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CNSTQ6PJW8 725 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 C4orf22Q6V702 233 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 ATG14Q6ZNE5 492 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 SYVN1Q86TM6 617 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 DCUN1D3Q8IWE4 304 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 OTUD6BQ8N6M0 293 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 ASZ1Q8WWH4 475 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 NAPGQ99747 312 aaPredicted RBP17.15■□□□□ 0.34
SMG1-203ENST00000532700 GPR87Q9BY21 358 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 SYNPO2LQ9H987 977 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 FANCEQ9HB96 536 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 TCFL5Q9UL49 500 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 NUP210LQ5VU65 1888 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 GOLGA6L10A0A0M3HER8 536 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 ZCWPW2A0A1B0GU75 182 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 CTAGE9A4FU28 777 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 E7EQ34 232 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 NDUFS3O75489 264 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 BANF1O75531 89 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 C1orf105O95561 183 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 CD9P21926 228 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 MCM3P25205 808 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 GRIA3P42263 894 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 MAGEA3P43357 314 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 PLOD1Q02809 727 aaPredicted RBP17.14■□□□□ 0.33
SMG1-203ENST00000532700 IGFBP7Q16270 282 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 LACTB2Q53H82 288 aaPredicted RBP17.14■□□□□ 0.33
SMG1-203ENST00000532700 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.14■□□□□ 0.33
SMG1-203ENST00000532700 CCDC137Q6PK04 289 aaKnown RBP17.14■□□□□ 0.33
SMG1-203ENST00000532700 UNC5DQ6UXZ4 953 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 DENND6AQ8IWF6 608 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 ZNF655Q8N720 491 aaPredicted RBP17.14■□□□□ 0.33
SMG1-203ENST00000532700 OR2L8Q8NGY9 312 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 GIMAP7Q8NHV1 300 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 TCTN2Q96GX1 697 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 SERPINB12Q96P63 405 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 GBP5Q96PP8 586 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 TTC1Q99614 292 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 NLNQ9BYT8 704 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 SLC22A11Q9NSA0 550 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 GNPTGQ9UJJ9 305 aa17.14■□□□□ 0.33
SMG1-203ENST00000532700 A0A1W2PPV9 198 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 RASGRF2O14827 1237 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 RFPL1O75677 317 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 KLF7O75840 302 aaPredicted RBP17.13■□□□□ 0.33
SMG1-203ENST00000532700 OR2B3O76000 313 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 MED26O95402 600 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 RECKO95980 971 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 RPS15P62841 145 aaKnown RBP17.13■□□□□ 0.33
SMG1-203ENST00000532700 CDK16Q00536 496 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 FASTKQ14296 549 aaKnown RBP17.13■□□□□ 0.33
SMG1-203ENST00000532700 KIR2DS3Q14952 304 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 NCF4Q15080 339 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 ACSBG2Q5FVE4 666 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 PAPD7Q5XG87 772 aaKnown RBP17.13■□□□□ 0.33
SMG1-203ENST00000532700 ZNF549Q6P9A3 640 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 APLFQ8IW19 511 aaPredicted RBP17.13■□□□□ 0.33
SMG1-203ENST00000532700 ZBTB2Q8N680 514 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 ZNF669Q96BR6 464 aaPredicted RBP17.13■□□□□ 0.33
SMG1-203ENST00000532700 SERTAD3Q9UJW9 196 aa17.13■□□□□ 0.33
SMG1-203ENST00000532700 SETXQ7Z333 2677 aaKnown RBP17.13■□□□□ 0.33
SMG1-203ENST00000532700 SPTA1P02549 2419 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 RELNP78509 3460 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 CYSRT1A8MQ03 144 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 CTSVO60911 334 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 S1PR4O95977 384 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 KLK3P07288 261 aaPredicted RBP17.12■□□□□ 0.33
SMG1-203ENST00000532700 RAB40ALP0C0E4 278 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 TMED2Q15363 201 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 ANKRD20A4Q4UJ75 823 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 CILP2Q8IUL8 1156 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 NAT8LQ8N9F0 302 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 SIGLEC10Q96LC7 697 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 TSSK1BQ9BXA7 367 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 CHRNA10Q9GZZ6 450 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 SYTL2Q9HCH5 934 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 FBXO6Q9NRD1 293 aaPredicted RBP17.12■□□□□ 0.33
SMG1-203ENST00000532700 SNX7Q9UNH6 387 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 SAR1BQ9Y6B6 198 aa17.12■□□□□ 0.33
SMG1-203ENST00000532700 ASH1LQ9NR48 2969 aaKnown RBP17.12■□□□□ 0.33
SMG1-203ENST00000532700 ARHGEF33A8MVX0 844 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 FANCGO15287 622 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 ZSCAN9O15535 394 aaPredicted RBP17.11■□□□□ 0.33
SMG1-203ENST00000532700 PHF2O75151 1096 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 PPARGP37231 505 aaPredicted RBP17.11■□□□□ 0.33
SMG1-203ENST00000532700 CASRP41180 1078 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 CTBP1Q13363 440 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 ATP1A4Q13733 1029 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 DHX34Q14147 1143 aaKnown RBP17.11■□□□□ 0.33
SMG1-203ENST00000532700 ZNF470Q6ECI4 717 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 RHBDD2Q6NTF9 364 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 TCTN3Q6NUS6 607 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 NEPROQ6NW34 567 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 CASC4Q6P4E1 433 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 OTOAQ7RTW8 1153 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 HOOK3Q86VS8 718 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 LRRC6Q86X45 466 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 SKA2Q8WVK7 121 aaPredicted RBP17.11■□□□□ 0.33
SMG1-203ENST00000532700 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.11■□□□□ 0.33
SMG1-203ENST00000532700 PANX3Q96QZ0 392 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms