RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SLC29A4Q7RTT9 530 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 CLNKQ7Z7G1 428 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 CADM2Q8N3J6 435 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 CNTD1Q8N815 330 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 GSTCDQ8NEC7 633 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 RHBDD1Q8TEB9 315 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 MRPL38Q96DV4 380 aaKnown RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 HHIPQ96QV1 700 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 C8orf4Q9NR00 106 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 WFS1O76024 890 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PGLSO95336 258 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 MYL9P24844 172 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 SUOXP51687 545 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 ZNF33AQ06730 810 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 DPYSQ14117 519 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 MZT2BQ6NZ67 158 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 P4HA3Q7Z4N8 544 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PACS2Q86VP3 889 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PNPT1Q8TCS8 783 aaKnown RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 ART5Q96L15 291 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 EFCAB11Q9BUY7 163 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 HRASLS2Q9NWW9 162 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 FAM86C2PA6NEL3 165 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PLGP00747 810 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 CBSLP0DN79 551 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 NR2F6P10588 404 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 PRPS2P11908 318 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 AQP1P29972 269 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 CBSP35520 551 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 ARCN1P48444 511 aaKnown RBP11.06□□□□□ -0.64
PTPRK-221ENST00000532331 HSPB3Q12988 150 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 GPRIN1Q7Z2K8 1008 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 SMPDL3BQ92485 455 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 TMEM125Q96AQ2 219 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 NECTIN3Q9NQS3 549 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 ACSS2Q9NR19 701 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
PTPRK-221ENST00000532331 ELOVL7A1L3X0 281 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 NPHS1O60500 1241 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 NIPSNAP2O75323 286 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 PREPP48147 710 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CDK9P50750 372 aaKnown RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 GDF10P55107 478 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 FOLH1Q04609 750 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 SGCBQ16585 318 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 GPRC6AQ5T6X5 926 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 MBOAT1Q6ZNC8 495 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CXXC5Q7LFL8 322 aaKnown RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 DCBLD1Q8N8Z6 715 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 UBASH3BQ8TF42 649 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CNTN6Q9UQ52 1028 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 MYH1P12882 1939 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 TMEM189-UBE2V1I3L0A0 370 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 MUSKO15146 869 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 UGT2B11O75310 529 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 OR4F21O95013 312 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 SHMT2P34897 504 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 TMEM115Q12893 351 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 SLBPQ14493 270 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 ARMC3Q5W041 872 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 RTL4Q6ZR62 310 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 AP4B1Q9Y6B7 739 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 A8MUI8 341 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 C2orf74A8MZ97 194 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 MID1O15344 667 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 DNAJA2O60884 412 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 METTL18O95568 372 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 POLR2CP19387 275 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 ADSLP30566 484 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 BDKRB1P46663 353 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 AP1S2P56377 157 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 ACTR3P61158 418 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 QPCTQ16769 361 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 ZNF730Q6ZMV8 503 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 RALGPS2Q86X27 583 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 NUDT13Q86X67 352 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 DCUN1D3Q8IWE4 304 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 PQLC1Q8N2U9 271 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 COX18Q8N8Q8 333 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 OR2T34Q8NGX1 318 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 PIH1D2Q8WWB5 315 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 SLC2A13Q96QE2 648 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 GALNT8Q9NY28 637 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CALML5Q9NZT1 146 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 DMTF1Q9Y222 760 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 SETD1AO15047 1707 aaKnown RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 C2orf71A6NGG8 1288 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 IGLON5A6NGN9 336 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 K7EPI3 171 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 GSC2O15499 205 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 RABIFP47224 123 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 SPPL2CQ8IUH8 684 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 ZMIZ2Q8NF64 920 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CDADC1Q9BWV3 514 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CMTM6Q9NX76 183 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 MAP4K5Q9Y4K4 846 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 TIPRLO75663 272 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms