RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 HIST1H2AHQ96KK5 128 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 CCDC138Q96M89 665 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 FERD3LQ96RJ6 166 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 HIST1H2AJQ99878 128 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 MRPL57Q9BQC6 102 aaKnown RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 H2AFJQ9BTM1 129 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 EPB41L1Q9H4G0 881 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 RUVBL2Q9Y230 463 aaKnown RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 KNL1Q8NG31 2342 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 EME2A4GXA9 379 aaPredicted RBP12.15□□□□□ -0.46
COPB1-208ENST00000532088 PABPN1LA6NDY0 278 aaKnown RBP12.15□□□□□ -0.46
COPB1-208ENST00000532088 ARHGEF33A8MVX0 844 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 HMGB1P1B2RPK0 211 aaPredicted RBP12.15□□□□□ -0.46
COPB1-208ENST00000532088 PRPF4O43172 522 aaKnown RBP eCLIP12.15□□□□□ -0.46
COPB1-208ENST00000532088 TFEBP19484 476 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 HNMTP50135 292 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 GPS2Q13227 327 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 KRT33BQ14525 404 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 TCEA2Q15560 299 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 TSNQ15631 228 aaKnown RBP12.15□□□□□ -0.46
COPB1-208ENST00000532088 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.15□□□□□ -0.46
COPB1-208ENST00000532088 TBCELQ5QJ74 424 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 STPG1Q5TH74 334 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 TMEM26Q6ZUK4 368 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 NAXDQ8IW45 347 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 TCAIMQ8N3R3 496 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 EID2Q8N6I1 236 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 OR5AR1Q8NGP9 310 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 OR9A1PQ8NGU1 263 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 HMGCLL1Q8TB92 370 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 RDH11Q8TC12 318 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 NETO1Q8TDF5 533 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 PATE1Q8WXA2 126 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 ATL1Q8WXF7 558 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 PTERQ96BW5 349 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 ATP6V1G3Q96LB4 118 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 APOLD1Q96LR9 279 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 ATOH8Q96SQ7 321 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 CDC6Q99741 560 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 TWSG1Q9GZX9 223 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 MRPL46Q9H2W6 279 aaKnown RBP12.15□□□□□ -0.46
COPB1-208ENST00000532088 CENPHQ9H3R5 247 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 MED4Q9NPJ6 270 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 RXFP3Q9NSD7 469 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 NUDT4Q9NZJ9 180 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 MID2Q9UJV3 735 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 ADAMTS6Q9UKP5 1117 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 PADI4Q9UM07 663 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 PDE10AQ9Y233 779 aa12.15□□□□□ -0.46
COPB1-208ENST00000532088 ARHGEF17Q96PE2 2063 aaPredicted RBP12.15□□□□□ -0.46
COPB1-208ENST00000532088 CABIN1Q9Y6J0 2220 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 LY6G6EA0A0G2JKS1 128 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 SLC35F4A4IF30 521 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 NPEPPSL1A6NEC2 478 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 C4orf47A7E2U8 309 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 GOLGA8RI6L899 631 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 CDC7O00311 574 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 TM9SF1O15321 606 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 TYROBPO43914 113 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 KLK8O60259 260 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 CBFA2T3O75081 653 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 LDOC1O95751 146 aaPredicted RBP12.14□□□□□ -0.47
COPB1-208ENST00000532088 GP1BAP07359 652 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 ACP1P24666 158 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 SHMT2P34897 504 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 RAB28P51157 221 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 MAZP56270 477 aaKnown RBP12.14□□□□□ -0.47
COPB1-208ENST00000532088 PSMA6P60900 246 aaKnown RBP12.14□□□□□ -0.47
COPB1-208ENST00000532088 GRB7Q14451 532 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 TGFBIQ15582 683 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 CLPPQ16740 277 aaPredicted RBP12.14□□□□□ -0.47
COPB1-208ENST00000532088 METTL2BQ6P1Q9 378 aaKnown RBP12.14□□□□□ -0.47
COPB1-208ENST00000532088 FRA10AC1Q70Z53 315 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 PIP4P1Q86T03 277 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 C4orf33Q8N1A6 199 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 PDPRQ8NCN5 879 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 CFAP61Q8NHU2 1237 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 DLG3Q92796 817 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 FBXL8Q96CD0 374 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 CAMK1GQ96NX5 476 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 MENTQ9BUN1 341 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 IQCGQ9H095 443 aaKnown RBP12.14□□□□□ -0.47
COPB1-208ENST00000532088 ALG9Q9H6U8 611 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 OR6C2Q9NZP2 312 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 SIRPGQ9P1W8 387 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 LNPEPQ9UIQ6 1025 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 IKZF3Q9UKT9 509 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 RNF112Q9ULX5 631 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 BTBD3Q9Y2F9 522 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 PLLPQ9Y342 182 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 CFAP20Q9Y6A4 193 aaKnown RBP12.14□□□□□ -0.47
COPB1-208ENST00000532088 U3KQA8 63 aa12.14□□□□□ -0.47
COPB1-208ENST00000532088 RHPN2P1A8MT19 583 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 TARM1B6A8C7 271 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 MATN2O00339 956 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 PPM1DO15297 605 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 SYF2O95926 243 aaKnown RBP12.13□□□□□ -0.47
COPB1-208ENST00000532088 ANXA5P08758 320 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 TPBGLP0DKB5 382 aa12.13□□□□□ -0.47
COPB1-208ENST00000532088 CKMT2P17540 419 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms