RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 SLC22A18Q96BI1 424 aa21.57■■□□□ 1.04
LRRK1-208ENST00000532029 UBXN10Q96LJ8 280 aa21.57■■□□□ 1.04
LRRK1-208ENST00000532029 CCDC138Q96M89 665 aa21.57■■□□□ 1.04
LRRK1-208ENST00000532029 SCNM1Q9BWG6 230 aa21.57■■□□□ 1.04
LRRK1-208ENST00000532029 NMRAL1Q9HBL8 299 aa21.57■■□□□ 1.04
LRRK1-208ENST00000532029 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.57■■□□□ 1.04
LRRK1-208ENST00000532029 TBK1Q9UHD2 729 aa21.57■■□□□ 1.04
LRRK1-208ENST00000532029 IKZF3Q9UKT9 509 aa21.57■■□□□ 1.04
LRRK1-208ENST00000532029 POMT2Q9UKY4 750 aa21.57■■□□□ 1.04
LRRK1-208ENST00000532029 CCDC151A5D8V7 595 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 TOX3O15405 576 aaPredicted RBP21.56■■□□□ 1.04
LRRK1-208ENST00000532029 CD1DP15813 335 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 PNLIPRP1P54315 467 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 AP1S2P56377 157 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 FOXK2Q01167 660 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 TSNQ15631 228 aaKnown RBP21.56■■□□□ 1.04
LRRK1-208ENST00000532029 CYP2A13Q16696 494 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 PHKG1Q16816 387 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 FBXO38Q6PIJ6 1188 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 SBSNQ6UWP8 590 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 TDRPQ86YL5 185 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 SYTL1Q8IYJ3 562 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 LINC01555Q8NAE3 123 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 RCBTB1Q8NDN9 531 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 OR2W6PQ8NHA6 318 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 EPS8L3Q8TE67 593 aaKnown RBP21.56■■□□□ 1.04
LRRK1-208ENST00000532029 LIN37Q96GY3 246 aaPredicted RBP21.56■■□□□ 1.04
LRRK1-208ENST00000532029 ARL15Q9NXU5 204 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 SPHK1Q9NYA1 384 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 KLK13Q9UKR3 277 aa21.56■■□□□ 1.04
LRRK1-208ENST00000532029 CCDC187A0A096LP49 1063 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 TLCD2A6NGC4 264 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 HGSO14964 777 aaPredicted RBP21.55■■□□□ 1.04
LRRK1-208ENST00000532029 KIF1CO43896 1103 aaKnown RBP21.55■■□□□ 1.04
LRRK1-208ENST00000532029 CDH16O75309 829 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 SLC16A8O95907 504 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 ERGP11308 486 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 UGT2B7P16662 529 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 SPINK2P20155 84 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 CDH3P22223 829 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 PRDX3P30048 256 aaKnown RBP21.55■■□□□ 1.04
LRRK1-208ENST00000532029 CSTF2P33240 577 aaKnown RBP eCLIP21.55■■□□□ 1.04
LRRK1-208ENST00000532029 GMPRP36959 345 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 MAGEA12P43365 314 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 CSRP3P50461 194 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 KPNA2P52292 529 aaKnown RBP21.55■■□□□ 1.04
LRRK1-208ENST00000532029 IRF9Q00978 393 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 TSTA3Q13630 321 aaPredicted RBP21.55■■□□□ 1.04
LRRK1-208ENST00000532029 FAM83EQ2M2I3 478 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 PRSS42Q7Z5A4 293 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 ARHGAP22Q7Z5H3 698 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 LMNTD1Q8N9Z9 388 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 HMGCLL1Q8TB92 370 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 KCTD4Q8WVF5 259 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 SMPDL3AQ92484 453 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 TSNARE1Q96NA8 513 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 MAP3K3Q99759 626 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 CMKLR1Q99788 373 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 UTP6Q9NYH9 597 aaKnown RBP21.55■■□□□ 1.04
LRRK1-208ENST00000532029 NEUROG3Q9Y4Z2 214 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 OARD1Q9Y530 152 aa21.55■■□□□ 1.04
LRRK1-208ENST00000532029 COL27A1Q8IZC6 1860 aaPredicted RBP21.55■■□□□ 1.04
LRRK1-208ENST00000532029 UNC13CQ8NB66 2214 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 TLDC2A0PJX2 215 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 AGRPO00253 132 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 CTIFO43310 598 aaKnown RBP21.54■■□□□ 1.04
LRRK1-208ENST00000532029 ANKRD34CP0C6C1 535 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 OAS2P29728 719 aaKnown RBP21.54■■□□□ 1.04
LRRK1-208ENST00000532029 DLG1Q12959 904 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 EIF3IQ13347 325 aaKnown RBP21.54■■□□□ 1.04
LRRK1-208ENST00000532029 C16orf72Q14CZ0 275 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 RASA2Q15283 850 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 SPESP1Q6UW49 350 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 TIFABQ6ZNK6 161 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 RAB11FIP2Q7L804 512 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 CARFQ8N187 725 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 AGBL5Q8NDL9 886 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 ZNF480Q8WV37 535 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 ATL1Q8WXF7 558 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 KIAA1191Q96A73 305 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 NXNL1Q96CM4 212 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 CABS1Q96KC9 395 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 IGSF5Q9NSI5 407 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 STOX2Q9P2F5 926 aaPredicted RBP21.54■■□□□ 1.04
LRRK1-208ENST00000532029 WASF3Q9UPY6 502 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 PLAAQ9Y263 795 aa21.54■■□□□ 1.04
LRRK1-208ENST00000532029 KLHL2O95198 593 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 GUCA1CO95843 209 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 MT-ND3P03897 115 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 TFEBP19484 476 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 IMPA1P29218 277 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 PEBP1P30086 187 aaKnown RBP21.53■■□□□ 1.04
LRRK1-208ENST00000532029 ARL4DP49703 201 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 SEPHS1P49903 392 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 FASTKQ14296 549 aaKnown RBP21.53■■□□□ 1.04
LRRK1-208ENST00000532029 PPP1R3AQ16821 1122 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 KLC3Q6P597 504 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 MBOAT1Q6ZNC8 495 aa21.53■■□□□ 1.04
LRRK1-208ENST00000532029 CENPLQ8N0S6 344 aaPredicted RBP21.53■■□□□ 1.04
LRRK1-208ENST00000532029 RIBC1Q8N443 379 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms