RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 OCA2Q04671 838 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 RBPJQ06330 500 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 CACNG1Q06432 222 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 MFAP5Q13361 173 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 BRD3Q15059 726 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 ZIC1Q15915 447 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 TAZQ16635 292 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 FAM214AQ32MH5 1076 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 VWA2Q5GFL6 755 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 CAVIN1Q6NZI2 390 aaKnown RBP11.1□□□□□ -0.63
CMTM1-215ENST00000531885 CDKL3Q8IVW4 592 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-215ENST00000531885 RCOR2Q8IZ40 523 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 DNAJC22Q8N4W6 341 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 CLDN19Q8N6F1 224 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 OR1N1Q8NGS0 311 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 SUN3Q8TAQ9 357 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 LMF1Q96S06 567 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 SLX1AQ9BQ83 275 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 TBL1YQ9BQ87 522 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 CRB3Q9BUF7 120 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 SOX17Q9H6I2 414 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-215ENST00000531885 LUC7LQ9NQ29 371 aaKnown RBP11.1□□□□□ -0.63
CMTM1-215ENST00000531885 IFNKQ9P0W0 207 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 HYOU1Q9Y4L1 999 aa11.1□□□□□ -0.63
CMTM1-215ENST00000531885 hCG_1818297A0A087WSY0 165 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 TRAV17A0A0B4J275 112 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 APOC4-APOC2K7ER74 178 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 SOCS6O14544 535 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 MAP2K7O14733 419 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 CNOT3O75175 753 aaKnown RBP11.09□□□□□ -0.63
CMTM1-215ENST00000531885 ALOX12BO75342 701 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 APOC2P02655 101 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 ACPPP15309 386 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 FDXRP22570 491 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 PSMB4P28070 264 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 GRNP28799 593 aaKnown RBP11.09□□□□□ -0.63
CMTM1-215ENST00000531885 ADRA1AP35348 466 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 CETN2P41208 172 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 GABRA4P48169 554 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 RAB28P51157 221 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 AP2B1P63010 937 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 ITIH4Q14624 930 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 NKG7Q16617 165 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.09□□□□□ -0.63
CMTM1-215ENST00000531885 KIRREL2Q6UWL6 708 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 TMEM207Q6UWW9 146 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 RPTNQ6XPR3 784 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 NLRP9Q7RTR0 991 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 LUZP1Q86V48 1076 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 MCATQ8IVS2 390 aaKnown RBP11.09□□□□□ -0.63
CMTM1-215ENST00000531885 KBTBD2Q8IY47 623 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 KATNAL2Q8IYT4 538 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 RAB42Q8N4Z0 105 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 RELTQ969Z4 430 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 DNAJC1Q96KC8 554 aaKnown RBP11.09□□□□□ -0.63
CMTM1-215ENST00000531885 NRTNQ99748 197 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 SELENOSQ9BQE4 189 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 TSSK1BQ9BXA7 367 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.09□□□□□ -0.63
CMTM1-215ENST00000531885 SLC26A1Q9H2B4 701 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 CUTCQ9NTM9 273 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 SPHK1Q9NYA1 384 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 INTUQ9ULD6 942 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 HS3ST3B1Q9Y662 390 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 FAM169AQ9Y6X4 670 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 MYO7BQ6PIF6 2116 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 F8P00451 2351 aa11.09□□□□□ -0.63
CMTM1-215ENST00000531885 TRGV8A0A0C4DH27 118 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 TRBV5-4A0A0C4DH59 114 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 H7C0S8 307 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 CCL22O00626 93 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 KCNN4O15554 427 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 CBFA2T2O43439 604 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 HCRTR1O43613 425 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 S1PR4O95977 384 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 HPP00738 406 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 CRYABP02511 175 aaKnown RBP11.08□□□□□ -0.64
CMTM1-215ENST00000531885 MAGP20916 626 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 CXCR2P25025 360 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 FOXL2P58012 376 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-215ENST00000531885 DNAJC21Q5F1R6 531 aaKnown RBP11.08□□□□□ -0.64
CMTM1-215ENST00000531885 ANKRD20A2Q5SQ80 823 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 ANKRD20A1Q5TYW2 823 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 ANKRD20A3Q5VUR7 823 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 TTC23LQ6PF05 361 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 DARS2Q6PI48 645 aaKnown RBP11.08□□□□□ -0.64
CMTM1-215ENST00000531885 BNC2Q6ZN30 1099 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-215ENST00000531885 SHISA6Q6ZSJ9 500 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 ZNF808Q8N4W9 903 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-215ENST00000531885 GSDMBQ8TAX9 411 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 STYXQ8WUJ0 223 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 NR4A3Q92570 626 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 DNAJC7Q99615 494 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 SPSB2Q99619 263 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 HEMGNQ9BXL5 484 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 NHEJ1Q9H9Q4 299 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-215ENST00000531885 ZNF160Q9HCG1 818 aa11.08□□□□□ -0.64
CMTM1-215ENST00000531885 SPTLC3Q9NUV7 552 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms