RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 OR2Y1Q8NGV0 311 aa16.19■□□□□ 0.18
CPSF1-207ENST00000531727 CFAP61Q8NHU2 1237 aa16.19■□□□□ 0.18
CPSF1-207ENST00000531727 SLC22A18Q96BI1 424 aa16.19■□□□□ 0.18
CPSF1-207ENST00000531727 NDC1Q9BTX1 674 aa16.19■□□□□ 0.18
CPSF1-207ENST00000531727 IRAK4Q9NWZ3 460 aa16.19■□□□□ 0.18
CPSF1-207ENST00000531727 EURLQ9NYK6 297 aa16.19■□□□□ 0.18
CPSF1-207ENST00000531727 PTRH2Q9Y3E5 179 aaKnown RBP16.19■□□□□ 0.18
CPSF1-207ENST00000531727 SNRNP200O75643 2136 aaKnown RBP16.19■□□□□ 0.18
CPSF1-207ENST00000531727 S1PR4O95977 384 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 GP1BBP13224 206 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 GNLYP22749 145 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 SESN2P58004 480 aaPredicted RBP16.18■□□□□ 0.18
CPSF1-207ENST00000531727 SLC9A5Q14940 896 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 NKAIN1Q4KMZ8 207 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 PTRHD1Q6GMV3 140 aaKnown RBP16.18■□□□□ 0.18
CPSF1-207ENST00000531727 MRPL14Q6P1L8 145 aaKnown RBP16.18■□□□□ 0.18
CPSF1-207ENST00000531727 C4orf22Q6V702 233 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 C2orf73Q8N5S3 287 aaPredicted RBP16.18■□□□□ 0.18
CPSF1-207ENST00000531727 RBMXL3Q8N7X1 1067 aaKnown RBP16.18■□□□□ 0.18
CPSF1-207ENST00000531727 Q8NA96 180 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 OR2L8Q8NGY9 312 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 DLG3Q92796 817 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 FER1L6-AS2Q96M78 137 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 IL17FQ96PD4 163 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 MFRPQ9BY79 579 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 IL22Q9GZX6 179 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 P2RY12Q9H244 342 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 TREX1Q9NSU2 369 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 C5AR2Q9P296 337 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 CIDEBQ9UHD4 219 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 DRG1Q9Y295 367 aaKnown RBP16.18■□□□□ 0.18
CPSF1-207ENST00000531727 KLHL20Q9Y2M5 609 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 DOPEY2Q9Y3R5 2298 aa16.18■□□□□ 0.18
CPSF1-207ENST00000531727 PEX12O00623 359 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 RASGRF2O14827 1237 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 CNOT3O75175 753 aaKnown RBP16.17■□□□□ 0.18
CPSF1-207ENST00000531727 IGHEP01854 428 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 GCGRP47871 477 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 NPY2RP49146 381 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 CRADDP78560 199 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 RAPSNQ13702 412 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 INPP5JQ15735 1006 aaPredicted RBP16.17■□□□□ 0.18
CPSF1-207ENST00000531727 DCAF10Q5QP82 559 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 VWA5B1Q5TIE3 1220 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 SLC6A19Q695T7 634 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 TAX1BP1Q86VP1 789 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 MCATQ8IVS2 390 aaKnown RBP16.17■□□□□ 0.18
CPSF1-207ENST00000531727 MPP5Q8N3R9 675 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 LMNTD1Q8N9Z9 388 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 CLEC1AQ8NC01 280 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 PNPLA2Q96AD5 504 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 PTERQ96BW5 349 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 PSMG3-AS1Q96PY0 264 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 PANX3Q96QZ0 392 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 RAB11FIP5Q9BXF6 653 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 SLAMF7Q9NQ25 335 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 INTS7Q9NVH2 962 aaKnown RBP16.17■□□□□ 0.18
CPSF1-207ENST00000531727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.17■□□□□ 0.18
CPSF1-207ENST00000531727 GNPTGQ9UJJ9 305 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 SLC39A10Q9ULF5 831 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 ZKSCAN5Q9Y2L8 839 aa16.17■□□□□ 0.18
CPSF1-207ENST00000531727 NUP210LQ5VU65 1888 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 CCDC88CQ9P219 2028 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 BLACEA4D250 179 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 AP3B1O00203 1094 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 KPNA5O15131 536 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 NDUFS3O75489 264 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 UMODP07911 640 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 ALAS2P22557 587 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 RPS3P23396 243 aaKnown RBP eCLIP16.16■□□□□ 0.18
CPSF1-207ENST00000531727 NMBRP28336 390 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 ARSFP54793 590 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 BASP1P80723 227 aaKnown RBP16.16■□□□□ 0.18
CPSF1-207ENST00000531727 PRR30Q53SZ7 412 aaPredicted RBP16.16■□□□□ 0.18
CPSF1-207ENST00000531727 TTC23LQ6PF05 361 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 PPP1R32Q7Z5V6 425 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 LRRC6Q86X45 466 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 GSDMBQ8TAX9 411 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 DENND1AQ8TEH3 1009 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 FKBP10Q96AY3 582 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 SLC22A11Q9NSA0 550 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 P4HTMQ9NXG6 502 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 BFARQ9NZS9 450 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 LUZP4Q9P127 313 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 NBASA2RRP1 2371 aa16.16■□□□□ 0.18
CPSF1-207ENST00000531727 A0A1B0GX78 115 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 PRICKLE3O43900 615 aaPredicted RBP16.15■□□□□ 0.18
CPSF1-207ENST00000531727 FKBP9O95302 570 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 C1orf105O95561 183 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 VARSP26640 1264 aaKnown RBP16.15■□□□□ 0.18
CPSF1-207ENST00000531727 FOXL2P58012 376 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 MYBPC3Q14896 1274 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 SF1Q15637 639 aaKnown RBP16.15■□□□□ 0.18
CPSF1-207ENST00000531727 ZC3H12BQ5HYM0 836 aaKnown RBP16.15■□□□□ 0.18
CPSF1-207ENST00000531727 FHL5Q5TD97 284 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 FCRL6Q6DN72 434 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 FIGLAQ6QHK4 219 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 TTLL10Q6ZVT0 673 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 GSTA5Q7RTV2 222 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms