RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SNX32Q86XE0 403 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 CPSF7Q8N684 471 aaKnown RBP3.43□□□□□ -1.86
PTPRK-220ENST00000531466 RFFLQ8WZ73 363 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 TEKT1Q969V4 418 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 FAM149B1Q96BN6 582 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 POLR1BQ9H9Y6 1135 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 SDR39U1Q9NRG7 319 aaPredicted RBP3.43□□□□□ -1.86
PTPRK-220ENST00000531466 PDRG1Q9NUG6 133 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 ARGLU1Q9NWB6 273 aaPredicted RBP3.43□□□□□ -1.86
PTPRK-220ENST00000531466 KNSTRNQ9Y448 316 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 SNX5Q9Y5X3 404 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 UNC13AQ9UPW8 1703 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 KAT6BQ8WYB5 2073 aa3.43□□□□□ -1.86
PTPRK-220ENST00000531466 ELOVL7A1L3X0 281 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 C19orf81C9J6K1 198 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 TMEM63AO94886 807 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 DDX58O95786 925 aaKnown RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 ZNF853P0CG23 659 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 TNFAIP3P21580 790 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 ACADLP28330 430 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 PBX3P40426 434 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 PRPHP41219 470 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 GPR143P51810 404 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 CYCSP99999 105 aaKnown RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 DMKNQ6E0U4 476 aaPredicted RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 FAM109BQ6ICB4 259 aaPredicted RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 C1orf122Q6ZSJ8 110 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 BTN2A1Q7KYR7 527 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 KIRREL3Q8IZU9 778 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 TMEM116Q8NCL8 245 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 SGCDQ92629 289 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 HDAC2Q92769 488 aaKnown RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 ZKSCAN4Q969J2 545 aaPredicted RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 ZNF486Q96H40 463 aaPredicted RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 PDLIM5Q96HC4 596 aaKnown RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 HGH1Q9BTY7 390 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 KAT14Q9H8E8 782 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 ZNHIT6Q9NWK9 470 aaKnown RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 NPAP1Q9NZP6 1156 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 C6orf203Q9P0P8 240 aaPredicted RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 CTNNA3Q9UI47 895 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 GRID1Q9ULK0 1009 aa3.42□□□□□ -1.86
PTPRK-220ENST00000531466 RRP15Q9Y3B9 282 aaKnown RBP3.42□□□□□ -1.86
PTPRK-220ENST00000531466 MYH15Q9Y2K3 1946 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 NDUFS3O75489 264 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 HIST1H2ABP04908 130 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 HIST1H2ADP20671 130 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 BCL3P20749 454 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 CCNCP24863 283 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 CTNNA1P35221 906 aaKnown RBP3.41□□□□□ -1.86
PTPRK-220ENST00000531466 TUBP50607 506 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 UBXN2AP68543 259 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 KRT83P78385 493 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 TFAP4Q01664 338 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 ROR1Q01973 937 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 DMTNQ08495 405 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 BECN1Q14457 450 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 RILPL1Q5EBL4 403 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 MFSD4BQ5TF39 518 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 INO80CQ6PI98 192 aaPredicted RBP3.41□□□□□ -1.86
PTPRK-220ENST00000531466 RAPH1Q70E73 1250 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 HIST3H2AQ7L7L0 130 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 ABHD12Q8N2K0 398 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 OR10G8Q8NGN5 311 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 ATP8B4Q8TF62 1192 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 C17orf50Q8WW18 174 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 TOMM40LQ969M1 308 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 SLC45A3Q96JT2 553 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 C7orf26Q96N11 449 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 GSDMAQ96QA5 445 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 NUDCD1Q96RS6 583 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 SLC22A12Q96S37 553 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 LZTS2Q9BRK4 669 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 ZNF577Q9BSK1 485 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 AP1M1Q9BXS5 423 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 AGXT2Q9BYV1 514 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 DBNDD1Q9H9R9 158 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 PREBQ9HCU5 417 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 HOXC10Q9NYD6 342 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 PA2G4Q9UQ80 394 aaKnown RBP3.41□□□□□ -1.86
PTPRK-220ENST00000531466 ZNF510Q9Y2H8 683 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 FANCIQ9NVI1 1328 aa3.41□□□□□ -1.86
PTPRK-220ENST00000531466 A0A087X0M5 115 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 PRSS51A0A1B0GVH4 220 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 A0A1B0GX30 115 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 OGG1O15527 345 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 DFFBO76075 338 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 CD4P01730 458 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 PRB2P02812 416 aaPredicted RBP3.4□□□□□ -1.87
PTPRK-220ENST00000531466 CCDC172P0C7W6 258 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 DESP17661 470 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 CAPN3P20807 821 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 STIP1P31948 543 aaKnown RBP3.4□□□□□ -1.87
PTPRK-220ENST00000531466 PPP2R2BQ00005 443 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 DMPKQ09013 629 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 PRKG2Q13237 762 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 ABRAXAS1Q6UWZ7 409 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 BRINP3Q76B58 766 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 HEATR4Q86WZ0 1026 aa3.4□□□□□ -1.87
PTPRK-220ENST00000531466 ZNF713Q8N859 430 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms