RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PTMAP06454 111 aaKnown RBP17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 CD63P08962 238 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 OR56A5P0C7T3 313 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 PSMA3P25788 255 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 PKLRP30613 574 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 KIR2DS3Q14952 304 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 Q6ZS92 163 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 TTLL10Q6ZVT0 673 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 TAX1BP1Q86VP1 789 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 VRK3Q8IV63 474 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 LINC01555Q8NAE3 123 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 OR52K1Q8NGK4 314 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 OR13J1Q8NGT2 312 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 C5orf34Q96MH7 638 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 TMEM121Q9BTD3 319 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 SLC6A20Q9NP91 592 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 ATP13A2Q9NQ11 1180 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 SLC2A6Q9UGQ3 507 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 FBXL4Q9UKA2 621 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 PACSIN2Q9UNF0 486 aaPredicted RBP17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 SLC5A6Q9Y289 635 aa17.71■□□□□ 0.43
SSSCA1-206ENST00000531405 HEATR5BQ9P2D3 2071 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 TCRBV7S2A1N4TA0A589 114 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 IPO13O94829 963 aaKnown RBP17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 ITGA3P26006 1051 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 GCGRP47871 477 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 SOX8P57073 446 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 HIF1AQ16665 826 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 SKOR2Q2VWA4 1001 aaPredicted RBP17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 P3H1Q32P28 736 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 MCATQ8IVS2 390 aaKnown RBP17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 CFAP61Q8NHU2 1237 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 LKAAEAR1Q8TD35 194 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 TM9SF4Q92544 642 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 HDAC10Q969S8 669 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 IL17FQ96PD4 163 aa17.7■□□□□ 0.42
SSSCA1-206ENST00000531405 GOLGA6L9A6NEM1 432 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 KLHL41O60662 606 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 ZNF189O75820 626 aaPredicted RBP17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 GOT2P00505 430 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 MCM3P25205 808 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 CCR7P32248 378 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 GRIA3P42263 894 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 RAB28P51157 221 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 HSPA14Q0VDF9 509 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 AIMP2Q13155 320 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 KLF1Q13351 362 aaPredicted RBP17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 ELOAQ14241 798 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 SHISA6Q6ZSJ9 500 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 SLC22A15Q8IZD6 547 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 TTC13Q8NBP0 860 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 ACRBPQ8NEB7 543 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 UBE2Q2Q8WVN8 375 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 DLG3Q92796 817 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 CALR3Q96L12 384 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 BARD1Q99728 777 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 MENTQ9BUN1 341 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 CDC23Q9UJX2 597 aa17.69■□□□□ 0.42
SSSCA1-206ENST00000531405 CSMD1Q96PZ7 3565 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 A0A1B0GX78 115 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 IQCF5A8MTL0 148 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 BTNL10A8MVZ5 291 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 SOCS6O14544 535 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 PSMD3O43242 534 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 KDM1AO60341 852 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 MMP11P24347 488 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 PLOD1Q02809 727 aaPredicted RBP17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 GRB7Q14451 532 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 SEMA3AQ14563 771 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 DNAJC21Q5F1R6 531 aaKnown RBP17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 PRAMEF13Q5VWM6 474 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 FCRL6Q6DN72 434 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 RAD9BQ6WBX8 426 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 COX15Q7KZN9 410 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 DTWD1Q8N5C7 304 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 METTL27Q8N6F8 245 aaPredicted RBP17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 DNAAF3Q8N9W5 541 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 SLC35B2Q8TB61 432 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 ZNF778Q96MU6 729 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 WDR77Q9BQA1 342 aaPredicted RBP17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 NOVA2Q9UNW9 492 aaKnown RBP17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 APCP25054 2843 aa17.68■□□□□ 0.42
SSSCA1-206ENST00000531405 CD9P21926 228 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 GRIA1P42261 906 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 CDH17Q12864 832 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 NKG7Q16617 165 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 AFTPHQ6ULP2 937 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 ZNF534Q76KX8 674 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 OVCH1Q7RTY7 1134 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 PEX26Q7Z412 305 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 LINC00523Q86TU6 105 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 KRT222Q8N1A0 295 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 ATG4AQ8WYN0 398 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 FKBP10Q96AY3 582 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 PANX2Q96RD6 677 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 SPSB2Q99619 263 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 MESP1Q9BRJ9 268 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 SOX17Q9H6I2 414 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms