RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 OTOGLQ3ZCN5 2332 aa18.48■□□□□ 0.55
SMPD1-205ENST00000531303 ALPPL2P10696 532 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 IMPDH1P20839 514 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 MDH1P40925 334 aaKnown RBP18.47■□□□□ 0.55
SMPD1-205ENST00000531303 HNMTP50135 292 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 HERVK_113P63132 956 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 PTCHD3Q3KNS1 767 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 C14orf28Q4W4Y0 310 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 CFAP157Q5JU67 520 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 CDKL4Q5MAI5 379 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 TCAIMQ8N3R3 496 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 RAB42Q8N4Z0 105 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 GPR156Q8NFN8 814 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 PPP4R1Q8TF05 950 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 ERVK-6Q9BXR3 956 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 SEMA4GQ9NTN9 838 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 ICKQ9UPZ9 632 aa18.47■□□□□ 0.55
SMPD1-205ENST00000531303 STX16-NPEPL1H3BU86 382 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 STX16O14662 325 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 PPM1DO15297 605 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 SIGLEC6O43699 453 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 KDM1AO60341 852 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 SUPT7LO94864 414 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 WDR47O94967 919 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 TSPAN8P19075 237 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 CCR10P46092 362 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 DNAJB13P59910 316 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 NFKB2Q00653 900 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 ASPHQ12797 758 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 UNC50Q53HI1 259 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 ZNF678Q5SXM1 525 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 SUSD1Q6UWL2 747 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 SLC35F3Q8IY50 421 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 ARL10Q8N8L6 244 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 OR4C6Q8NH72 309 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 CKAP2Q8WWK9 683 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 NSUN5Q96P11 429 aaKnown RBP18.46■□□□□ 0.55
SMPD1-205ENST00000531303 DUSP23Q9BVJ7 150 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 CD244Q9BZW8 370 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 SRMSQ9H3Y6 488 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 STN1Q9H668 368 aaKnown RBP18.46■□□□□ 0.55
SMPD1-205ENST00000531303 MANSC1Q9H8J5 431 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 RXFP3Q9NSD7 469 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 WDR87Q6ZQQ6 2873 aa18.46■□□□□ 0.55
SMPD1-205ENST00000531303 RHPN2P1A8MT19 583 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 PCDHGA12O60330 932 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 STK16O75716 305 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 PKLRP30613 574 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 PPM1FP49593 454 aaPredicted RBP18.46■□□□□ 0.54
SMPD1-205ENST00000531303 RAB28P51157 221 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 CDH13P55290 713 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 PDK4Q16654 411 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 THEMIS2Q5TEJ8 643 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 CES4AQ5XG92 561 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 ANKS6Q68DC2 871 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 PRR23CQ6ZRP0 262 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 TMEM26Q6ZUK4 368 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 MTERF4Q7Z6M4 381 aaKnown RBP18.46■□□□□ 0.54
SMPD1-205ENST00000531303 TEX9Q8N6V9 391 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 SNX31Q8N9S9 440 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 LRRC8CQ8TDW0 803 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 ZNF75CPQ92670 426 aaPredicted RBP18.46■□□□□ 0.54
SMPD1-205ENST00000531303 SH3KBP1Q96B97 665 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 L3HYPDHQ96EM0 354 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 MENTQ9BUN1 341 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 TBC1D10AQ9BXI6 508 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 KCNH6Q9H252 994 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 ZNF395Q9H8N7 513 aaPredicted RBP18.46■□□□□ 0.54
SMPD1-205ENST00000531303 PARD6AQ9NPB6 346 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 SPATA7Q9P0W8 599 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 OPTCQ9UBM4 332 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 ANGPTL3Q9Y5C1 460 aa18.46■□□□□ 0.54
SMPD1-205ENST00000531303 TNPO3Q9Y5L0 923 aaKnown RBP18.46■□□□□ 0.54
SMPD1-205ENST00000531303 EP300Q09472 2414 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-205ENST00000531303 E7ENX8 843 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 SERPINE1P05121 402 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 TBPL1P62380 186 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 TAP2Q03519 686 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 STX3Q13277 289 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 SUZ12Q15022 739 aaKnown RBP18.45■□□□□ 0.54
SMPD1-205ENST00000531303 PCBP2Q15366 365 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMPD1-205ENST00000531303 CYP2A13Q16696 494 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-205ENST00000531303 ZCCHC8Q6NZY4 707 aaKnown RBP18.45■□□□□ 0.54
SMPD1-205ENST00000531303 AMIGO1Q86WK6 493 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 C17orf82Q86X59 251 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-205ENST00000531303 TRIM42Q8IWZ5 723 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 LINC01555Q8NAE3 123 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 OR10G6Q8NH81 332 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 UBTD2Q8WUN7 234 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 APOLD1Q96LR9 279 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 MAGEB18Q96M61 343 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 SLC38A3Q99624 504 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 EDEM2Q9BV94 578 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 PITPNM3Q9BZ71 974 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 SHCBP1LQ9BZQ2 653 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 SEMA4BQ9NPR2 832 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-205ENST00000531303 LRIT1Q9P2V4 623 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 SLC22A14Q9Y267 594 aa18.45■□□□□ 0.54
SMPD1-205ENST00000531303 BTBD3Q9Y2F9 522 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms