RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 CTAGE9A4FU28 777 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 USP27XA6NNY8 438 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 E5RI56 91 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 E7EQ34 232 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 MEN1O00255 615 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 RASGRF2O14827 1237 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 SUV39H1O43463 412 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 NIPSNAP2O75323 286 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 C1orf105O95561 183 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 S1PR4O95977 384 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 HBQ1P09105 142 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 PKMP14618 531 aaKnown RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 CHRM3P20309 590 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 CD9P21926 228 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 PEBP1P30086 187 aaKnown RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 CCNFP41002 786 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 GNG11P61952 73 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 KCNAB2Q13303 367 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 PTK6Q13882 451 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 ERV3-1Q14264 604 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 GBX1Q14549 363 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 LONRF1Q17RB8 773 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 ZNF789Q5FWF6 425 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 ATP1A1-AS1Q5TC04 95 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 PRAMEF17Q5VTA0 474 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 PAPD7Q5XG87 772 aaKnown RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 ZNF517Q6ZMY9 492 aaPredicted RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 CENPUQ71F23 418 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 LMNTD2Q8IXW0 634 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 SLC38A9Q8NBW4 561 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 OR2L8Q8NGY9 312 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 MAGEC3Q8TD91 643 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 RAD51AP1Q96B01 352 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 RUNDC3BQ96NL0 473 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 NAPGQ99747 312 aaPredicted RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 TRIM56Q9BRZ2 755 aaKnown RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 MENTQ9BUN1 341 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 SLC25A18Q9H1K4 315 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 CHST8Q9H2A9 424 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 CCDC68Q9H2F9 335 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 AKIRIN1Q9H9L7 192 aaPredicted RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 FAM60AQ9NP50 221 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 INTS7Q9NVH2 962 aaKnown RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 IL1RAPL1Q9NZN1 696 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 FARSAQ9Y285 508 aaKnown RBP12.62□□□□□ -0.39
SSH3-206ENST00000529224 AP1M2Q9Y6Q5 423 aa12.62□□□□□ -0.39
SSH3-206ENST00000529224 NUP210LQ5VU65 1888 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 ZCWPW2A0A1B0GU75 182 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 CDC14CA4D256 554 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 DNALI1O14645 258 aaPredicted RBP12.61□□□□□ -0.39
SSH3-206ENST00000529224 OR2B3O76000 313 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 FKBP9O95302 570 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 RORAP35398 523 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 CSRP3P50461 194 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 GRB7Q14451 532 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 ZIC1Q15915 447 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 IZUMO3Q5VZ72 239 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 CNSTQ6PJW8 725 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 SYDE1Q6ZW31 735 aaPredicted RBP12.61□□□□□ -0.39
SSH3-206ENST00000529224 SYVN1Q86TM6 617 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 SYTL1Q8IYJ3 562 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 C2orf73Q8N5S3 287 aaPredicted RBP12.61□□□□□ -0.39
SSH3-206ENST00000529224 ZBTB2Q8N680 514 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 LINC01555Q8NAE3 123 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSH3-206ENST00000529224 GABPB2Q8TAK5 448 aaPredicted RBP12.61□□□□□ -0.39
SSH3-206ENST00000529224 FAM136AQ96C01 138 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 SIGLEC10Q96LC7 697 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 IL17FQ96PD4 163 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 DPH2Q9BQC3 489 aaPredicted RBP12.61□□□□□ -0.39
SSH3-206ENST00000529224 C20orf96Q9NUD7 363 aaPredicted RBP12.61□□□□□ -0.39
SSH3-206ENST00000529224 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.61□□□□□ -0.39
SSH3-206ENST00000529224 KLHL42Q9P2K6 505 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 CIDEBQ9UHD4 219 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 NFS1Q9Y697 457 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 SAR1BQ9Y6B6 198 aa12.61□□□□□ -0.39
SSH3-206ENST00000529224 ZNF749O43361 778 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 MATN4O95460 622 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 TTC4O95801 387 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 FURINP09958 794 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 RAB40ALP0C0E4 278 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 AGXTP21549 392 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 BDKRB1P46663 353 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 GABRA4P48169 554 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 CTBP1Q13363 440 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 DEFB110Q30KQ9 67 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 TTLL9Q3SXZ7 439 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 TLDC1Q6P9B6 456 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 TAX1BP1Q86VP1 789 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 DENND6AQ8IWF6 608 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 AGGF1Q8N302 714 aaeCLIP12.6□□□□□ -0.39
SSH3-206ENST00000529224 DNAJC22Q8N4W6 341 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 RUFY1Q96T51 708 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 FAM167BQ9BTA0 163 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 NAT9Q9BTE0 207 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 NLNQ9BYT8 704 aa12.6□□□□□ -0.39
SSH3-206ENST00000529224 FBXO6Q9NRD1 293 aaPredicted RBP12.6□□□□□ -0.39
SSH3-206ENST00000529224 FAM114A2Q9NRY5 505 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms