RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 EIF2B3Q9NR50 452 aaKnown RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 HOMER3Q9NSC5 361 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 POT1Q9NUX5 634 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 OCIAD1Q9NX40 245 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 TRMT1Q9NXH9 659 aaKnown RBP8.23□□□□□ -1.09
SSBP3-212ENST00000528930 SMARCAL1Q9NZC9 954 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 COPG2Q9UBF2 871 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 CROTQ9UKG9 612 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 PILRAQ9UKJ1 303 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 PSMD13Q9UNM6 376 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 NEU2Q9Y3R4 380 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 PRSS21Q9Y6M0 314 aa8.23□□□□□ -1.09
SSBP3-212ENST00000528930 TCRBV7S3A2A0A539 114 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 KLHL33A6NCF5 533 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 USP27XA6NNY8 438 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 A8MU76 341 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 B4E171 279 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 UBXN7O94888 489 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 C9P02748 559 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 SNRPB2P08579 225 aaKnown RBP8.22□□□□□ -1.09
SSBP3-212ENST00000528930 RALBP11234 206 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 TYRP1P17643 537 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 TPSB2P20231 275 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 COILP38432 576 aaPredicted RBP8.22□□□□□ -1.09
SSBP3-212ENST00000528930 TSPAN7P41732 249 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 HALP42357 657 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 MAPK9P45984 424 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 PGDP52209 483 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 GFERP55789 205 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 BASP1P80723 227 aaKnown RBP8.22□□□□□ -1.09
SSBP3-212ENST00000528930 GPR18Q14330 331 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 ITIH4Q14624 930 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 KCNJ11Q14654 390 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 TPSAB1Q15661 275 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 PCID2Q5JVF3 399 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 C16orf46Q6P387 395 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 C4orf22Q6V702 233 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 TAS2R42Q7RTR8 314 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 GSTA5Q7RTV2 222 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 TRIM48Q8IWZ4 208 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 RBM12BQ8IXT5 1001 aaKnown RBP8.22□□□□□ -1.09
SSBP3-212ENST00000528930 CFAP206Q8IYR0 622 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 AGBL5Q8NDL9 886 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 ACTRT1Q8TDG2 376 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 RSC1A1Q92681 617 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 PEX13Q92968 403 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 HDAC10Q969S8 669 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 CXorf40BQ96DE9 158 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 C14orf79Q96F83 325 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 DCUN1D1Q96GG9 259 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 SGSM3Q96HU1 749 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 RMDN2Q96LZ7 410 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 OSBPL9Q96SU4 736 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 AP1M1Q9BXS5 423 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 WWP1Q9H0M0 922 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 CHRAC1Q9NRG0 131 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 ACSL5Q9ULC5 683 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 POLHQ9Y253 713 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 TCAF1Q9Y4C2 921 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 PCDHGA9Q9Y5G4 932 aaKnown RBP8.22□□□□□ -1.09
SSBP3-212ENST00000528930 B3GALT1Q9Y5Z6 326 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 V9GYY5 206 aaPredicted RBP8.22□□□□□ -1.09
SSBP3-212ENST00000528930 NCOA6Q14686 2063 aaPredicted RBP8.22□□□□□ -1.09
SSBP3-212ENST00000528930 PIKFYVEQ9Y2I7 2098 aa8.22□□□□□ -1.09
SSBP3-212ENST00000528930 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ELOA3CA0A087WX78 387 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ELOA3DA6NLF2 546 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF185O15231 689 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 LRRTM2O43300 516 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 AP2A2O94973 939 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 SIX3O95343 332 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 GAS8O95995 478 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 GOT2P00505 430 aaKnown RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 POLBP06746 335 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ANKRD34CP0C6C1 535 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 MTHFD1P11586 935 aaKnown RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 PDHA2P29803 388 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 CSTF2P33240 577 aaKnown RBP eCLIP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 NSG1P42857 185 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 MAGEA6P43360 314 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 CAPZBP47756 277 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 NPY2RP49146 381 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 SESN2P58004 480 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 CRADDP78560 199 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ABHD18Q0P651 414 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 LAMB3Q13751 1172 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 SEMA3AQ14563 771 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 TRIP13Q15645 432 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ELOA3BQ3SY89 546 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 SNAP47Q5SQN1 464 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 DUS1LQ6P1R4 473 aaKnown RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 LRRC8BQ6P9F7 803 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 PACS1Q6VY07 963 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 NLRP9Q7RTR0 991 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 PLXDC1Q8IUK5 500 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 NLGN4XQ8N0W4 816 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 NLGN4YQ8NFZ3 816 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ELOA3Q8NG57 546 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 OR4L1Q8NH43 312 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms