RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 CARSP49589 748 aaKnown RBP11.1□□□□□ -0.63
CMTM1-211ENST00000528484 CASP6P55212 293 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 OCA2Q04671 838 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 RBPJQ06330 500 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 CACNG1Q06432 222 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 MFAP5Q13361 173 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 BRD3Q15059 726 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 ZIC1Q15915 447 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 TAZQ16635 292 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 FAM214AQ32MH5 1076 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 VWA2Q5GFL6 755 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 CAVIN1Q6NZI2 390 aaKnown RBP11.1□□□□□ -0.63
CMTM1-211ENST00000528484 CDKL3Q8IVW4 592 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-211ENST00000528484 RCOR2Q8IZ40 523 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 DNAJC22Q8N4W6 341 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 CLDN19Q8N6F1 224 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 OR1N1Q8NGS0 311 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 SUN3Q8TAQ9 357 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 LMF1Q96S06 567 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 SLX1AQ9BQ83 275 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 TBL1YQ9BQ87 522 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 CRB3Q9BUF7 120 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 SOX17Q9H6I2 414 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-211ENST00000528484 LUC7LQ9NQ29 371 aaKnown RBP11.1□□□□□ -0.63
CMTM1-211ENST00000528484 IFNKQ9P0W0 207 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 HYOU1Q9Y4L1 999 aa11.1□□□□□ -0.63
CMTM1-211ENST00000528484 hCG_1818297A0A087WSY0 165 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 TRAV17A0A0B4J275 112 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 APOC4-APOC2K7ER74 178 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 SOCS6O14544 535 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 MAP2K7O14733 419 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 CNOT3O75175 753 aaKnown RBP11.09□□□□□ -0.63
CMTM1-211ENST00000528484 ALOX12BO75342 701 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 APOC2P02655 101 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 ACPPP15309 386 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 FDXRP22570 491 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 PSMB4P28070 264 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 GRNP28799 593 aaKnown RBP11.09□□□□□ -0.63
CMTM1-211ENST00000528484 ADRA1AP35348 466 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 CETN2P41208 172 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 GABRA4P48169 554 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 RAB28P51157 221 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 AP2B1P63010 937 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 ITIH4Q14624 930 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 NKG7Q16617 165 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.09□□□□□ -0.63
CMTM1-211ENST00000528484 KIRREL2Q6UWL6 708 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 TMEM207Q6UWW9 146 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 RPTNQ6XPR3 784 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 NLRP9Q7RTR0 991 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 LUZP1Q86V48 1076 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 MCATQ8IVS2 390 aaKnown RBP11.09□□□□□ -0.63
CMTM1-211ENST00000528484 KBTBD2Q8IY47 623 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 KATNAL2Q8IYT4 538 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 RAB42Q8N4Z0 105 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 RELTQ969Z4 430 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 DNAJC1Q96KC8 554 aaKnown RBP11.09□□□□□ -0.63
CMTM1-211ENST00000528484 NRTNQ99748 197 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 SELENOSQ9BQE4 189 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 TSSK1BQ9BXA7 367 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.09□□□□□ -0.63
CMTM1-211ENST00000528484 SLC26A1Q9H2B4 701 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 CUTCQ9NTM9 273 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 SPHK1Q9NYA1 384 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 INTUQ9ULD6 942 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 HS3ST3B1Q9Y662 390 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 FAM169AQ9Y6X4 670 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 MYO7BQ6PIF6 2116 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 F8P00451 2351 aa11.09□□□□□ -0.63
CMTM1-211ENST00000528484 TRGV8A0A0C4DH27 118 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 TRBV5-4A0A0C4DH59 114 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 H7C0S8 307 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 CCL22O00626 93 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 KCNN4O15554 427 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 CBFA2T2O43439 604 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 HCRTR1O43613 425 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 S1PR4O95977 384 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 HPP00738 406 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 CRYABP02511 175 aaKnown RBP11.08□□□□□ -0.64
CMTM1-211ENST00000528484 MAGP20916 626 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 CXCR2P25025 360 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 FOXL2P58012 376 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-211ENST00000528484 DNAJC21Q5F1R6 531 aaKnown RBP11.08□□□□□ -0.64
CMTM1-211ENST00000528484 ANKRD20A2Q5SQ80 823 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 ANKRD20A1Q5TYW2 823 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 ANKRD20A3Q5VUR7 823 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 TTC23LQ6PF05 361 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 DARS2Q6PI48 645 aaKnown RBP11.08□□□□□ -0.64
CMTM1-211ENST00000528484 BNC2Q6ZN30 1099 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-211ENST00000528484 SHISA6Q6ZSJ9 500 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 ZNF808Q8N4W9 903 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-211ENST00000528484 GSDMBQ8TAX9 411 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 STYXQ8WUJ0 223 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 NR4A3Q92570 626 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 DNAJC7Q99615 494 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 SPSB2Q99619 263 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 HEMGNQ9BXL5 484 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 NHEJ1Q9H9Q4 299 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms