RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CASTOR1Q8WTX7 329 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 LRRC58Q96CX6 371 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 DCSTAMPQ9H295 470 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 SOHLH2Q9NX45 425 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 FAM198AQ9UFP1 575 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 SPIN1Q9Y657 262 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 GRIN2DO15399 1336 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MYMKA6NI61 221 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF821O75541 412 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ARL6IP5O75915 188 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 IGSF6O95976 241 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 RHOP08100 348 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MMP3P08254 477 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 DNASE1P24855 282 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 POLR2HP52434 150 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 PPP5CP53041 499 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 NIPAL4Q0D2K0 466 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MOGQ16653 247 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 C14orf28Q4W4Y0 310 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CPTPQ5TA50 214 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 SPATA19Q7Z5L4 167 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MRPL41Q8IXM3 137 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CLIP4Q8N3C7 705 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF676Q8N7Q3 588 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 UBR7Q8N806 425 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ACER1Q8TDN7 264 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 COPS5Q92905 334 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 RERGQ96A58 199 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MOAP1Q96BY2 351 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CDK5RAP1Q96SZ6 601 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 PLEKHA3Q9HB20 300 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 KCNH7Q9NS40 1196 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TAS2R10Q9NYW0 307 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 E7EQ34 232 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 E7ESA3 106 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 BOLA2-SMG1P6H3BVE0 249 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MAGEC1O60732 1142 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 SCELO95171 688 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 SNAP29O95721 258 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 GKN3PP0CG01 181 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CD9P21926 228 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 EPHA3P29320 983 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 GRIA2P42262 883 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CAMLGP49069 296 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 POLR2LP62875 67 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 FGL1Q08830 312 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 EFEMP1Q12805 493 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF829Q3KNS6 432 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ANKDD1AQ495B1 522 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 FBXO43Q4G163 708 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 XKR6Q5GH73 641 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 FIGNQ5HY92 759 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MPP7Q5T2T1 576 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 LIPMQ5VYY2 423 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TRAPPC5Q8IUR0 188 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CRYBG2Q8N1P7 616 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 GALNT11Q8NCW6 608 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 OR5T1Q8NG75 326 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 AP2M1Q96CW1 435 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 SERPINB11Q96P15 392 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TWNKQ96RR1 684 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 SECISBP2Q96T21 854 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 WACQ9BTA9 647 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ARL6Q9H0F7 186 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 FBRSQ9HAH7 460 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ELOVL7A1L3X0 281 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MAN2B1O00754 1011 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 BHLHE40O14503 412 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 APOA2P02652 100 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CSTBP04080 98 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ACRP10323 421 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CDH1P12830 882 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CAPN3P20807 821 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CMPK1P30085 196 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 FXYD6P3P58550 94 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 DSG2Q14126 1118 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 PUM1Q14671 1186 aaKnown RBP eCLIP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SETMARQ53H47 684 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 GCNT6Q5T4J0 391 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CES3Q6UWW8 571 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 DCDC5Q6ZRR9 648 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ADAMTSL2Q86TH1 951 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 COMMD7Q86VX2 200 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MARCH9Q86YJ5 346 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MARVELD2Q8N4S9 558 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CPSF7Q8N684 471 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 DRAXINQ8NBI3 349 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MTMR9Q96QG7 549 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CGRRF1Q99675 332 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TCF25Q9BQ70 676 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SULT4A1Q9BR01 284 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 GPR88Q9GZN0 384 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 IL22Q9GZX6 179 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 DENND2DQ9H6A0 471 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 FANCFQ9NPI8 374 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 EIF2B4Q9UI10 523 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SLC27A6Q9Y2P4 619 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 RAD51DO75771 328 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TFEBP19484 476 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms