RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PABPC1P11940 636 aaKnown RBP17.12■□□□□ 0.33
USH1C-205ENST00000527020 NRIP1P48552 1158 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 BOP1Q14137 746 aaKnown RBP17.12■□□□□ 0.33
USH1C-205ENST00000527020 PLCL1Q15111 1095 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 TMEM259Q4ZIN3 620 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 ZDHHC20Q5W0Z9 365 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 GDPD4Q6W3E5 623 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 CCDC149Q6ZUS6 474 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 HSD11B1LQ7Z5J1 315 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 ADIPOR2Q86V24 386 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 MICU2Q8IYU8 434 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 LEMD2Q8NC56 503 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 OR52E4Q8NGH9 312 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 SKA2Q8WVK7 121 aaPredicted RBP17.12■□□□□ 0.33
USH1C-205ENST00000527020 SCAMP4Q969E2 229 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 AURKBQ96GD4 344 aaPredicted RBP17.12■□□□□ 0.33
USH1C-205ENST00000527020 INPP5KQ9BT40 448 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 UGT2B28Q9BY64 529 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 HPS4Q9NQG7 708 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 CLTBP09497 229 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 SDC1P18827 310 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 IST1P53990 364 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 ZIK1Q3SY52 487 aaPredicted RBP17.12■□□□□ 0.33
USH1C-205ENST00000527020 ZBED5Q49AG3 693 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 PLEKHS1Q5SXH7 462 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 ATG9BQ674R7 924 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 GCNT7Q6ZNI0 430 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 RASGRP3Q8IV61 690 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 APIPQ96GX9 242 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 TSSK3Q96PN8 268 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 HHIPQ96QV1 700 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 KCNH6Q9H252 994 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 SNX6Q9UNH7 406 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 SLC22A14Q9Y267 594 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 INVSQ9Y283 1065 aa17.12■□□□□ 0.33
USH1C-205ENST00000527020 NUP214P35658 2090 aaPredicted RBP17.12■□□□□ 0.33
USH1C-205ENST00000527020 WASH3PC4AMC7 463 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 NPIPB8E9PQR5 432 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 MOSPD3O75425 235 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 GMNNO75496 209 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 SCELO95171 688 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 CXCL14O95715 111 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 ACRP10323 421 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 PFKLP17858 780 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 SHMT2P34897 504 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 CDKN2CP42773 168 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 HNMTP50135 292 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 SP140Q13342 867 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 AP1ARQ63HQ0 302 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 TMEM215Q68D42 235 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 GPR141Q7Z602 305 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 GPR149Q86SP6 731 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 ERI1Q8IV48 349 aaKnown RBP17.11■□□□□ 0.33
USH1C-205ENST00000527020 SLC22A15Q8IZD6 547 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 BEND7Q8N7W2 519 aaPredicted RBP17.11■□□□□ 0.33
USH1C-205ENST00000527020 SLC47A1Q96FL8 570 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 CMTM7Q96FZ5 175 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 MUS81Q96NY9 551 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 SH3GL1Q99961 368 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 BBS2Q9BXC9 721 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 ELOVL6Q9H5J4 265 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 A0A096LPI6 279 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 CARNS1A5YM72 827 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 FAM220BPB1ANY3 271 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 ERN1O75460 977 aaKnown RBP17.11■□□□□ 0.33
USH1C-205ENST00000527020 PRKD3O94806 890 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 ALBP02768 609 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 HIST1H2AGP0C0S8 130 aaPredicted RBP17.11■□□□□ 0.33
USH1C-205ENST00000527020 HIST1H2ADP20671 130 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 ITPKAP23677 461 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 CALRP27797 417 aaKnown RBP17.11■□□□□ 0.33
USH1C-205ENST00000527020 YAP1P46937 504 aaKnown RBP17.11■□□□□ 0.33
USH1C-205ENST00000527020 PON2Q15165 354 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 STK32CQ86UX6 486 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 HOMEZQ8IX15 550 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 ELMOD1Q8N336 334 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 RNF175Q8N4F7 328 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 HIST1H2AHQ96KK5 128 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 EGLN2Q96KS0 407 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 HIST1H2AJQ99878 128 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 H2AFJQ9BTM1 129 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 EMILIN2Q9BXX0 1053 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 LINC00597Q9H2U6 94 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 DCAF13Q9NV06 445 aaKnown RBP17.11■□□□□ 0.33
USH1C-205ENST00000527020 PKD2L2Q9NZM6 624 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 DNAJB9Q9UBS3 223 aa17.11■□□□□ 0.33
USH1C-205ENST00000527020 SLC16A5O15375 505 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 GSNP06396 782 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 THRBP10828 461 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 PRPS2P11908 318 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 S100A3P33764 101 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 PFN3P60673 137 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 LAPTM5Q13571 262 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 CCNYL2Q5T2Q4 361 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 ZNF551Q7Z340 670 aaPredicted RBP17.1■□□□□ 0.33
USH1C-205ENST00000527020 ANKRD46Q86W74 232 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 HS3ST5Q8IZT8 346 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 FAM162AQ96A26 154 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 TESCQ96BS2 214 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 CRISPLD2Q9H0B8 497 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms