RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 TRIM73Q86UV7 250 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 DSELQ8IZU8 1212 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 LINC01555Q8NAE3 123 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 MR1Q95460 341 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 CAPZA3Q96KX2 299 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 C17orf62Q9BQA9 187 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 TRIM56Q9BRZ2 755 aaKnown RBP19.89■□□□□ 0.77
VPS28-206ENST00000526734 KLHL25Q9H0H3 589 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 SRPK3Q9UPE1 567 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 POLHQ9Y253 713 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 B8ZZF3 427 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 RAB40ALP0C0E4 278 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 ENO3P13929 434 aaPredicted RBP19.88■□□□□ 0.77
VPS28-206ENST00000526734 PTPN4P29074 926 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 PEBP1P30086 187 aaKnown RBP19.88■□□□□ 0.77
VPS28-206ENST00000526734 RORAP35398 523 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 SLC1A2P43004 574 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 GABRA4P48169 554 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 POLE2P56282 527 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 CRYMQ14894 314 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 SPANXN3Q5MJ09 141 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 PDIK1LQ8N165 341 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 AGGF1Q8N302 714 aaeCLIP19.88■□□□□ 0.77
VPS28-206ENST00000526734 LRRC39Q96DD0 335 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 EBNA1BP2Q99848 306 aaKnown RBP19.88■□□□□ 0.77
VPS28-206ENST00000526734 ACTL8Q9H568 366 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 FBXO5Q9UKT4 447 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 PLCL2Q9UPR0 1127 aa19.88■□□□□ 0.77
VPS28-206ENST00000526734 MRPS18BQ9Y676 258 aaKnown RBP19.88■□□□□ 0.77
VPS28-206ENST00000526734 COL6A6A6NMZ7 2263 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 EIF3FO00303 357 aaPredicted RBP19.87■□□□□ 0.77
VPS28-206ENST00000526734 OR2B3O76000 313 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 CATP04040 527 aaKnown RBP19.87■□□□□ 0.77
VPS28-206ENST00000526734 KCNAB2Q13303 367 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 ZIC1Q15915 447 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 TLDC1Q6P9B6 456 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 CNSTQ6PJW8 725 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 ZNF605Q86T29 641 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 KCNMB4Q86W47 210 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 DENND6AQ8IWF6 608 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 KLHL7Q8IXQ5 586 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 DENND1AQ8TEH3 1009 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 RNF31Q96EP0 1072 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 FAM60AQ9NP50 221 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 STARD5Q9NSY2 213 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 PCMTD2Q9NV79 361 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 IL1RAPL1Q9NZN1 696 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.87■□□□□ 0.77
VPS28-206ENST00000526734 FARSAQ9Y285 508 aaKnown RBP19.87■□□□□ 0.77
VPS28-206ENST00000526734 NFS1Q9Y697 457 aa19.87■□□□□ 0.77
VPS28-206ENST00000526734 ZNF839A8K0R7 811 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 CBSLP0DN79 551 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 AGXTP21549 392 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 IVDP26440 423 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 CBSP35520 551 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 HSD17B2P37059 387 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 BDKRB1P46663 353 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 CLCN7P51798 805 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 CTBP1Q13363 440 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 ARHGAP19Q14CB8 494 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 UGT8Q16880 541 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 DEFB109BQ30KR1 87 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 ZC3H12BQ5HYM0 836 aaKnown RBP19.86■□□□□ 0.77
VPS28-206ENST00000526734 LRRC8EQ6NSJ5 796 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 KIAA0408Q6ZU52 694 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 SYTL1Q8IYJ3 562 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 DNAJC22Q8N4W6 341 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 SLC38A9Q8NBW4 561 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 FBXO15Q8NCQ5 510 aaPredicted RBP19.86■□□□□ 0.77
VPS28-206ENST00000526734 PROKR1Q8TCW9 393 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 THAP4Q8WY91 577 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 IL17FQ96PD4 163 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 DHRS4Q9BTZ2 278 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 NLNQ9BYT8 704 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 SLC25A18Q9H1K4 315 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 CHST8Q9H2A9 424 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 FBXO6Q9NRD1 293 aaPredicted RBP19.86■□□□□ 0.77
VPS28-206ENST00000526734 ATMQ13315 3056 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 KALRNO60229 2985 aa19.86■□□□□ 0.77
VPS28-206ENST00000526734 TARM1B6A8C7 271 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 C9J4A7 227 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 ZSCAN9O15535 394 aaPredicted RBP19.85■□□□□ 0.77
VPS28-206ENST00000526734 ZNF749O43361 778 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 PSIP1O75475 530 aaKnown RBP19.85■□□□□ 0.77
VPS28-206ENST00000526734 CD63P08962 238 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 MPC1LP0DKB6 136 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 MAGP20916 626 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 DHX9Q08211 1270 aaKnown RBP19.85■□□□□ 0.77
VPS28-206ENST00000526734 ERV3-1Q14264 604 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 SF1Q15637 639 aaKnown RBP19.85■□□□□ 0.77
VPS28-206ENST00000526734 CYP2A13Q16696 494 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 KLHL38Q2WGJ6 581 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 HSP90AA5PQ58FG0 334 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 ACSBG2Q5FVE4 666 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 RHBDD2Q6NTF9 364 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 UGT3A1Q6NUS8 523 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 FAM199XQ6PEV8 388 aaPredicted RBP19.85■□□□□ 0.77
VPS28-206ENST00000526734 LMNTD1Q8N9Z9 388 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 ZUFSPQ96AP4 578 aa19.85■□□□□ 0.77
VPS28-206ENST00000526734 SNF8Q96H20 258 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms