RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ZCCHC18P0CG32 403 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 SPP1P10451 314 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 INSRRP14616 1297 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 HOXB9P17482 250 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 CEBPBP17676 345 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ITGAXP20702 1163 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 GSTM2P28161 218 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 HTR2AP28223 471 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 HOXA6P31267 233 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 RYKP34925 604 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 MC3RP41968 323 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 MTHFSP49914 203 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 GPR143P51810 404 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ZNF75DP51815 510 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 CACNA2D1P54289 1103 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 RAP2BP61225 183 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 IRX1P78414 480 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 BASP1P80723 227 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 PDE1BQ01064 536 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 OTUD4Q01804 1114 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 ZP2Q05996 745 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 BST1Q10588 318 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ASPHQ12797 758 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 RIN1Q13671 783 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 BTG3Q14201 252 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 EIF4HQ15056 248 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 FAM174BQ3ZCQ3 159 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 HIKESHIQ53FT3 197 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 LRRC73Q5JTD7 316 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ATL3Q6DD88 541 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 RGS7BPQ6MZT1 257 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 TAPT1Q6NXT6 567 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 PAOXQ6QHF9 649 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 RNF144BQ7Z419 303 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 NEK8Q86SG6 692 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 YRDCQ86U90 279 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 TDRPQ86YL5 185 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ZDHHC17Q8IUH5 632 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 PYROXD2Q8N2H3 581 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ZBTB2Q8N680 514 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 TTC9BQ8N6N2 239 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 CCDC63Q8NA47 563 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ZNF397Q8NF99 534 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 OR9K2Q8NGE7 335 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 OR52L2PQ8NGH6 319 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 OR5M3Q8NGP4 307 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 OR6S1Q8NH40 331 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 MYCBPAPQ8TBZ2 947 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ATL1Q8WXF7 558 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 FCGR1BQ92637 280 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 GATA6Q92908 595 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 FAM46BQ96A09 425 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 KIAA1143Q96AT1 154 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 SYTL4Q96C24 671 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 ZNF707Q96C28 371 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 HAVCR1Q96D42 359 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 MS4A10Q96PG2 267 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 TRNT1Q96Q11 434 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 ADAM2Q99965 735 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 BPIFA3Q9BQP9 254 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 GTPBP2Q9BX10 602 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 SPZ1Q9BXG8 430 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 C1QTNF3Q9BXJ4 246 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 TDRD1Q9BXT4 1180 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 MRPL13Q9BYD1 178 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 KLC2Q9H0B6 622 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 SIRPDQ9H106 197 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 SMOC2Q9H3U7 446 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 AUNIPQ9H7T9 357 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 WDR76Q9H967 626 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 COG4Q9H9E3 785 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 CPNE5Q9HCH3 593 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 TRPC7Q9HCX4 862 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 TRIM36Q9NQ86 728 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ENTPD7Q9NQZ7 604 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ZCCHC3Q9NUD5 404 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 PIGVQ9NUD9 493 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 WWOXQ9NZC7 414 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 TFCP2L1Q9NZI6 479 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 PKD2L2Q9NZM6 624 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 VSX1Q9NZR4 365 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 EMC3Q9P0I2 261 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 VPS54Q9P1Q0 977 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 UPB1Q9UBR1 384 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 IL20RAQ9UHF4 553 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ZFP69BQ9UJL9 534 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 CDC42EP3Q9UKI2 254 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 FZD10Q9ULW2 581 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 MRPS33Q9Y291 106 aaKnown RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 FAM96BQ9Y3D0 163 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 DMRT1Q9Y5R6 373 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 RNF215Q9Y6U7 377 aa4.35□□□□□ -1.71
CD44-213ENST00000525209 ASTN2O75129 1339 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 SF3B1O75533 1304 aaKnown RBP eCLIP4.35□□□□□ -1.71
CD44-213ENST00000525209 DENND4BO75064 1496 aaPredicted RBP4.35□□□□□ -1.71
CD44-213ENST00000525209 OR6C68A6NDL8 312 aa4.34□□□□□ -1.71
CD44-213ENST00000525209 GABRR3A8MPY1 467 aa4.34□□□□□ -1.71
CD44-213ENST00000525209 H0YGN5 161 aa4.34□□□□□ -1.71
CD44-213ENST00000525209 H3BQ06 376 aaPredicted RBP4.34□□□□□ -1.71
CD44-213ENST00000525209 ZNF701M0R085 212 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms