RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 CDH17Q12864 832 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 PFKFB4Q16877 469 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 TIMM50Q3ZCQ8 353 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 DUPD1Q68J44 220 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MFSD7Q6UXD7 560 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 GTF2H5Q6ZYL4 71 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 GPR149Q86SP6 731 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 CCNYQ8ND76 341 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 CPEB3Q8NE35 698 aaKnown RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 OR4C5Q8NGB2 326 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 THAP6Q8TBB0 222 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ECHDC3Q96DC8 303 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 OR1F2PQ96R84 312 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 NACC1Q96RE7 527 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 RBM15Q96T37 977 aaKnown RBP eCLIP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MAPKAP1Q9BPZ7 522 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ZFYVE21Q9BQ24 234 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MAGEB5Q9BZ81 275 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 RAB34Q9BZG1 259 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 KAT8Q9H7Z6 458 aaKnown RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 NMUR1Q9HB89 426 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 LIPT1Q9Y234 373 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 FAM240BA0A1B0GVZ2 78 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 A0A1B0GW15 77 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MFSD2BA6NFX1 497 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 FBLL1A6NHQ2 334 aaKnown RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ELOA3DA6NLF2 546 aaPredicted RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MARCH11A6NNE9 402 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 RNF212BA8MTL3 300 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 E7ESA3 106 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 J3QR89 54 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 RFPL3O75679 317 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 LY86O95711 162 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 SPATA31D3P0C874 917 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ITPKAP23677 461 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 YWHAQP27348 245 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 IL15P40933 162 aaPredicted RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 HCAR3P49019 387 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 COMPP49747 757 aaPredicted RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 METAP2P50579 478 aaKnown RBP eCLIP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 GAD2Q05329 585 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 LEMD1Q68G75 181 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 LINC00299Q6ZSB3 139 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 SPATA31D4Q6ZUB0 917 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 PHTF2Q8N3S3 785 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 DHRSXQ8N5I4 330 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 XAGE3Q8WTP9 111 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 APBB2Q92870 758 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 YTHDF1Q9BYJ9 559 aaKnown RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MTG2Q9H4K7 406 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ANKRD19PQ9H560 264 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 SLC22A11Q9NSA0 550 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 SLC38A7Q9NVC3 462 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 HCN3Q9P1Z3 774 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 WASF2Q9Y6W5 498 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ZNF487B1APH4 448 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 H7C4K7 107 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 GNGT2O14610 69 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 PCDH8O95206 1070 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 IFNGP01579 166 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 SLC18A2Q05940 514 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 COL28A1Q2UY09 1125 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ZACNQ401N2 412 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 CBWD6Q4V339 395 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 EPHA10Q5JZY3 1008 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ZBTB37Q5TC79 503 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 FAM199XQ6PEV8 388 aaPredicted RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 OTOAQ7RTW8 1153 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 CATSPERDQ86XM0 798 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 PDZD9Q8IXQ8 264 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 RASGEF1CQ8N431 466 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 TTLL6Q8N841 843 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.79□□□□□ -1.322e-6■■■■□ 22.4
LIN7C-202ENST00000524596 ACTRT2Q8TDY3 377 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 TNFAIP8L1Q8WVP5 186 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 BPIFA2Q96DR5 249 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 L3HYPDHQ96EM0 354 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 AURKBQ96GD4 344 aaPredicted RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MID1IP1Q9NPA3 183 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 SPAG4Q9NPE6 437 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 PRDM9Q9NQV7 894 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 PCDHB10Q9UN67 800 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 PCDHB9Q9Y5E1 797 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 LOC102724428A0A0B4J2F2 783 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ERVV-1B6SEH8 477 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 H0YIN7 160 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MATN3O15232 486 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 CYP7B1O75881 506 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 CSN2P05814 226 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 TSPAN19P0C672 248 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 HNRNPA2B1P22626 353 aaKnown RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 SSTR2P30874 369 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 CCR6P51684 374 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 ARSFP54793 590 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 SIK1P57059 783 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 MLF1P58340 268 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 NCS1P62166 190 aa6.79□□□□□ -1.32
LIN7C-202ENST00000524596 NRG1Q02297 640 aaPredicted RBP6.79□□□□□ -1.32
LIN7C-202ENST00000524596 CAV1Q03135 178 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms