RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 FAM131AQ6UXB0 335 aa2.54□□□□□ -2
PCM1-222ENST00000524226 PRICKLE2Q7Z3G6 844 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SNX20Q7Z614 316 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SVOPLQ8N434 492 aa2.54□□□□□ -2
PCM1-222ENST00000524226 KLHL23Q8NBE8 558 aa2.54□□□□□ -2
PCM1-222ENST00000524226 NETO2Q8NC67 525 aa2.54□□□□□ -2
PCM1-222ENST00000524226 GSTCDQ8NEC7 633 aa2.54□□□□□ -2
PCM1-222ENST00000524226 BPIFB6Q8NFQ5 453 aa2.54□□□□□ -2
PCM1-222ENST00000524226 OR5T3Q8NGG3 340 aa2.54□□□□□ -2
PCM1-222ENST00000524226 C9orf43Q8TAL5 461 aaPredicted RBP2.54□□□□□ -2
PCM1-222ENST00000524226 TNFAIP8L1Q8WVP5 186 aa2.54□□□□□ -2
PCM1-222ENST00000524226 CEP295NLQ96MC4 621 aa2.54□□□□□ -2
PCM1-222ENST00000524226 TSGA13Q96PP4 275 aa2.54□□□□□ -2
PCM1-222ENST00000524226 PHB2Q99623 299 aa2.54□□□□□ -2
PCM1-222ENST00000524226 P2RY13Q9BPV8 354 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SHCBP1LQ9BZQ2 653 aa2.54□□□□□ -2
PCM1-222ENST00000524226 RMI1Q9H9A7 625 aa2.54□□□□□ -2
PCM1-222ENST00000524226 ELL3Q9HB65 397 aaPredicted RBP2.54□□□□□ -2
PCM1-222ENST00000524226 GLOD4Q9HC38 313 aa2.54□□□□□ -2
PCM1-222ENST00000524226 PCDHB16Q9NRJ7 776 aa2.54□□□□□ -2
PCM1-222ENST00000524226 TMEM248Q9NWD8 314 aa2.54□□□□□ -2
PCM1-222ENST00000524226 PIH1D1Q9NWS0 290 aaKnown RBP2.54□□□□□ -2
PCM1-222ENST00000524226 TDRKHQ9Y2W6 561 aaKnown RBP2.54□□□□□ -2
PCM1-222ENST00000524226 PCDHGB6Q9Y5F9 930 aa2.54□□□□□ -2
PCM1-222ENST00000524226 TEX264Q9Y6I9 313 aa2.54□□□□□ -2
PCM1-222ENST00000524226 A0A1W2PPM1 405 aa2.54□□□□□ -2
PCM1-222ENST00000524226 FAM172BPA6NC97 362 aa2.54□□□□□ -2
PCM1-222ENST00000524226 FAM72CH0Y354 149 aa2.54□□□□□ -2
PCM1-222ENST00000524226 GTPBP1O00178 669 aaKnown RBP2.54□□□□□ -2
PCM1-222ENST00000524226 CBX4O00257 560 aa2.54□□□□□ -2
PCM1-222ENST00000524226 XKRYO14609 159 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SLC22A2O15244 555 aa2.54□□□□□ -2
PCM1-222ENST00000524226 GFRA3O60609 400 aa2.54□□□□□ -2
PCM1-222ENST00000524226 TRMUO75648 421 aaKnown RBP2.54□□□□□ -2
PCM1-222ENST00000524226 KAT7O95251 611 aa2.54□□□□□ -2
PCM1-222ENST00000524226 GJB5O95377 273 aa2.54□□□□□ -2
PCM1-222ENST00000524226 NADKO95544 446 aaPredicted RBP2.54□□□□□ -2
PCM1-222ENST00000524226 IGHA2P01877 340 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SOD2P04179 222 aa2.54□□□□□ -2
PCM1-222ENST00000524226 RLN1P04808 185 aa2.54□□□□□ -2
PCM1-222ENST00000524226 COX4I1P13073 169 aa2.54□□□□□ -2
PCM1-222ENST00000524226 NPR2P20594 1047 aa2.54□□□□□ -2
PCM1-222ENST00000524226 TACR2P21452 398 aa2.54□□□□□ -2
PCM1-222ENST00000524226 ITGA3P26006 1051 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SLC6A4P31645 630 aa2.54□□□□□ -2
PCM1-222ENST00000524226 ARCN1P48444 511 aaKnown RBP2.54□□□□□ -2
PCM1-222ENST00000524226 AFF1P51825 1210 aaKnown RBP2.54□□□□□ -2
PCM1-222ENST00000524226 SLC18A1P54219 525 aa2.54□□□□□ -2
PCM1-222ENST00000524226 CRADDP78560 199 aa2.54□□□□□ -2
PCM1-222ENST00000524226 E2F2Q14209 437 aa2.54□□□□□ -2
PCM1-222ENST00000524226 PDK4Q16654 411 aa2.54□□□□□ -2
PCM1-222ENST00000524226 AP5B1Q2VPB7 878 aa2.54□□□□□ -2
PCM1-222ENST00000524226 KCTD21Q4G0X4 260 aa2.54□□□□□ -2
PCM1-222ENST00000524226 C4orf46Q504U0 113 aa2.54□□□□□ -2
PCM1-222ENST00000524226 FAM72AQ5TYM5 149 aa2.54□□□□□ -2
PCM1-222ENST00000524226 METTL21CQ5VZV1 264 aa2.54□□□□□ -2
PCM1-222ENST00000524226 FAM72DQ6L9T8 149 aa2.54□□□□□ -2
PCM1-222ENST00000524226 NEPROQ6NW34 567 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SYCE2Q6PIF2 218 aa2.54□□□□□ -2
PCM1-222ENST00000524226 CNSTQ6PJW8 725 aa2.54□□□□□ -2
PCM1-222ENST00000524226 PTCHD4Q6ZW05 846 aa2.54□□□□□ -2
PCM1-222ENST00000524226 CYP4V2Q6ZWL3 525 aaPredicted RBP2.54□□□□□ -2
PCM1-222ENST00000524226 RAB11FIP2Q7L804 512 aa2.54□□□□□ -2
PCM1-222ENST00000524226 GALNT7Q86SF2 657 aa2.54□□□□□ -2
PCM1-222ENST00000524226 JAZF1Q86VZ6 243 aa2.54□□□□□ -2
PCM1-222ENST00000524226 FAM72BQ86X60 149 aa2.54□□□□□ -2
PCM1-222ENST00000524226 HPS6Q86YV9 775 aa2.54□□□□□ -2
PCM1-222ENST00000524226 DENND1CQ8IV53 801 aa2.54□□□□□ -2
PCM1-222ENST00000524226 KBTBD2Q8IY47 623 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.54□□□□□ -25e-6■■■■■ 81.8
PCM1-222ENST00000524226 ZNF548Q8NEK5 533 aaPredicted RBP2.54□□□□□ -2
PCM1-222ENST00000524226 DNAJB14Q8TBM8 379 aa2.54□□□□□ -2
PCM1-222ENST00000524226 PIH1D2Q8WWB5 315 aa2.54□□□□□ -2
PCM1-222ENST00000524226 SLC9A6Q92581 669 aa2.54□□□□□ -2
PCM1-222ENST00000524226 KHSRPQ92945 711 aaKnown RBP eCLIP2.54□□□□□ -24e-7■■■□□ 18.8
PCM1-222ENST00000524226 NT5C3BQ969T7 300 aa2.54□□□□□ -2
PCM1-222ENST00000524226 GAL3ST3Q96A11 431 aa2.54□□□□□ -2
PCM1-222ENST00000524226 NSMCE3Q96MG7 304 aa2.54□□□□□ -2
PCM1-222ENST00000524226 BTBD9Q96Q07 612 aa2.54□□□□□ -2
PCM1-222ENST00000524226 PSKH2Q96QS6 385 aa2.54□□□□□ -2
PCM1-222ENST00000524226 RTKNQ9BST9 563 aa2.54□□□□□ -2
PCM1-222ENST00000524226 COMMD4Q9H0A8 199 aa2.54□□□□□ -2
PCM1-222ENST00000524226 BTBD1Q9H0C5 482 aa2.54□□□□□ -2
PCM1-222ENST00000524226 XKR8Q9H6D3 395 aa2.54□□□□□ -2
PCM1-222ENST00000524226 TMEM27Q9HBJ8 222 aa2.54□□□□□ -2
PCM1-222ENST00000524226 MTMR10Q9NXD2 777 aa2.54□□□□□ -2
PCM1-222ENST00000524226 RABL2AQ9UBK7 228 aaPredicted RBP2.54□□□□□ -2
PCM1-222ENST00000524226 ZNF639Q9UID6 485 aa2.54□□□□□ -2
PCM1-222ENST00000524226 MAFFQ9ULX9 164 aa2.54□□□□□ -2
PCM1-222ENST00000524226 RABL2BQ9UNT1 228 aa2.54□□□□□ -2
PCM1-222ENST00000524226 MRPS7Q9Y2R9 242 aaKnown RBP2.54□□□□□ -2
PCM1-222ENST00000524226 SAMHD1Q9Y3Z3 626 aaKnown RBP2.54□□□□□ -2
PCM1-222ENST00000524226 USP3Q9Y6I4 520 aa2.54□□□□□ -2
PCM1-222ENST00000524226 KCNE2Q9Y6J6 123 aa2.54□□□□□ -2
PCM1-222ENST00000524226 ZNF780BQ9Y6R6 833 aa2.54□□□□□ -2
PCM1-222ENST00000524226 THSD7BQ9C0I4 1608 aa2.54□□□□□ -2
PCM1-222ENST00000524226 RIIAD1A6NNX1 92 aa2.54□□□□□ -2
PCM1-222ENST00000524226 ADAMDEC1O15204 470 aa2.54□□□□□ -2
PCM1-222ENST00000524226 OR10H2O60403 315 aa2.54□□□□□ -2
PCM1-222ENST00000524226 OR10H3O60404 316 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms