RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 NAPBQ9H115 298 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 WDR6Q9NNW5 1121 aaKnown RBP4.78□□□□□ -1.64
NPM1-212ENST00000524204 PNPLA3Q9NST1 481 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 FAM212BQ9NTI7 297 aaPredicted RBP4.78□□□□□ -1.64
NPM1-212ENST00000524204 DDX18Q9NVP1 670 aaKnown RBP4.78□□□□□ -1.64
NPM1-212ENST00000524204 SEMA5BQ9P283 1151 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 OR14J1Q9UGF5 321 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 IPO11Q9UI26 975 aaKnown RBP4.78□□□□□ -1.64
NPM1-212ENST00000524204 KCNK6Q9Y257 313 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 MRPS7Q9Y2R9 242 aaKnown RBP4.78□□□□□ -1.64
NPM1-212ENST00000524204 JRKLQ9Y4A0 524 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 A3GALT2U3KPV4 340 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 PCF11O94913 1555 aaKnown RBP4.78□□□□□ -1.64
NPM1-212ENST00000524204 NSD2O96028 1365 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 CARMIL1Q5VZK9 1371 aa4.78□□□□□ -1.64
NPM1-212ENST00000524204 TTC21BQ7Z4L5 1316 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 WDR7Q9Y4E6 1490 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 SMIM35A0A1B0GVV1 85 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 FAM230AA0A1W2PPH8 454 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 A0A1W2PPW3 197 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 FAM149AA5PLN7 773 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 VCYO14598 125 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 NDUFS4O43181 175 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 FCGR3BO75015 233 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 ATP9AO75110 1047 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 NME6O75414 186 aaPredicted RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 CREG1O75629 220 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 TMCC1O94876 653 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 PGK2P07205 417 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 RAB40ALP0C0E4 278 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 LBPP18428 481 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 UBA1P22314 1058 aaKnown RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 NMBRP28336 390 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 PKLRP30613 574 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 GABRA5P31644 462 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 HSPA1LP34931 641 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 DHPSP49366 369 aaPredicted RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 VCPP55072 806 aaKnown RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 CDK3Q00526 305 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 FOLH1Q04609 750 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 IL24Q13007 206 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 SPP2Q13103 211 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 NR1D2Q14995 579 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 ZMYND11Q15326 602 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 PFKFB3Q16875 520 aaPredicted RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 KCTD21Q4G0X4 260 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 PLEKHO1Q53GL0 409 aaPredicted RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 SGO1Q5FBB7 561 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 PRAMEF19Q5SWL8 479 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 SPATA46Q5T0L3 261 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 DCAF12L2Q5VW00 463 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 KCTD11Q693B1 232 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 NCAPH2Q6IBW4 605 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 TMEM65Q6PI78 240 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 VSTM1Q6UX27 236 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 PQLC2Q6ZP29 291 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 TAS2R42Q7RTR8 314 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 VASH2Q86V25 355 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 GPR180Q86V85 440 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 NBPF5PQ86XG9 351 aaPredicted RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 ZCCHC7Q8N3Z6 543 aaKnown RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 NRACQ8N912 160 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 TMEM185AQ8NFB2 350 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 WDR20Q8TBZ3 569 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 FIG4Q92562 907 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 KAT2BQ92831 832 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 CCDC51Q96ER9 411 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 SGF29Q96ES7 293 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 LINGO1Q96FE5 620 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 COG3Q96JB2 828 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 SFXN2Q96NB2 322 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 TTC25Q96NG3 672 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 GSDMAQ96QA5 445 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 PLIN2Q99541 437 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 FEVQ99581 238 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 OLFM1Q99784 485 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 CPNE1Q99829 537 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 CCT7Q99832 543 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 ZNF416Q9BWM5 594 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 FRMD8Q9BZ67 464 aaPredicted RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 GCOM2Q9BZD3 368 aaPredicted RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 TMEM39BQ9GZU3 492 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 CDT1Q9H211 546 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 RAD21L1Q9H4I0 556 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 MAGIXQ9H6Y5 334 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 GORASP2Q9H8Y8 452 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 ACTR5Q9H9F9 607 aaPredicted RBP4.77□□□□□ -1.65
NPM1-212ENST00000524204 GPR108Q9NPR9 543 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 TRPV5Q9NQA5 729 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 NDRG3Q9UGV2 375 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 PLA2G4CQ9UP65 541 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 SQORQ9Y6N5 450 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 DISP3Q9P2K9 1392 aa4.77□□□□□ -1.65
NPM1-212ENST00000524204 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.76□□□□□ -1.65
NPM1-212ENST00000524204 ARPC4-TTLL3A0A0A6YYG9 625 aa4.76□□□□□ -1.65
NPM1-212ENST00000524204 C15orf38-AP3S2A0A0A6YYH1 394 aa4.76□□□□□ -1.65
NPM1-212ENST00000524204 A0A0U1RQF3 1178 aa4.76□□□□□ -1.65
NPM1-212ENST00000524204 MAGEA13PA6NCF6 341 aa4.76□□□□□ -1.65
NPM1-212ENST00000524204 CXorf65A6NEN9 183 aa4.76□□□□□ -1.65
NPM1-212ENST00000524204 TMEM202A6NGA9 273 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms