RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 UMODL1-AS1Q8N2C9 162 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 ZNF808Q8N4W9 903 aaPredicted RBP5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 FAM156AQ8NDB6 213 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 C9orf43Q8TAL5 461 aaPredicted RBP5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 KIAA1143Q96AT1 154 aaPredicted RBP5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 SARGQ9BW04 601 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 SLC39A8Q9C0K1 460 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 VPS16Q9H269 839 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 GANQ9H2C0 597 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 ADNPQ9H2P0 1102 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 DEF6Q9H4E7 631 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 DHX35Q9H5Z1 703 aaKnown RBP5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 GPN2Q9H9Y4 310 aaPredicted RBP5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 PDFQ9HBH1 243 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 ARNT2Q9HBZ2 717 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 PHPT1Q9NRX4 125 aaPredicted RBP5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 OCIAD1Q9NX40 245 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 TMEM9Q9P0T7 183 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 PCSK1NQ9UHG2 260 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 SUFUQ9UMX1 484 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 TMEM98Q9Y2Y6 226 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 PLEKHM1Q9Y4G2 1056 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 DOPEY2Q9Y3R5 2298 aa5.2□□□□□ -1.58
CTNNA1-239ENST00000523685 UNC13CQ8NB66 2214 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 BOD1L1Q8NFC6 3051 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 IGHV1OR21-1A0A087WYE8 117 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 A0A0U1RQS6 177 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CFAP69A5D8W1 941 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 SIGLEC16A6NMB1 481 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 TMCO5BA8MYB1 307 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 EPHB6O15197 1021 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 SLC43A1O75387 559 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 TPM2P07951 284 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 HOXC4P09017 264 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 THRAP10827 490 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 UNGP13051 313 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 GP1BBP13224 206 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 DESP17661 470 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CTPS1P17812 591 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 PSMA2P25787 234 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 TRIM23P36406 574 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 GPR1P46091 355 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 NDST2P52849 883 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 LIMK2P53671 638 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 UBE2HP62256 183 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CDK3Q00526 305 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 PTP4A2Q12974 167 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 NFATC2Q13469 925 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 TRA2AQ13595 282 aaKnown RBP eCLIP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 ZNF235Q14590 738 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 PTPRRQ15256 657 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CNN3Q15417 329 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CNGA3Q16281 694 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CA9Q16790 459 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 TCP11X2Q5H9J9 407 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 PPP6R3Q5H9R7 873 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 ATP1A1-AS1Q5TC04 95 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 RNF220Q5VTB9 566 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 HIST2H2BCQ6DN03 193 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 HSD11B1LQ7Z5J1 315 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 TRIM74Q86UV6 250 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 PPP1R3BQ86XI6 285 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 FAM90A1Q86YD7 464 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 NAGSQ8N159 534 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 OR4D9Q8NGE8 314 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 NCSTNQ92542 709 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 COQ10AQ96MF6 247 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 NSMCE3Q96MG7 304 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 WWC2-AS2Q96NR7 200 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 MNTQ99583 582 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CNPY3Q9BT09 278 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 PACSIN1Q9BY11 444 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 MRPL46Q9H2W6 279 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 GSTO2Q9H4Y5 243 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 LRRC19Q9H756 370 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 SARS2Q9NP81 518 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CD84Q9UIB8 345 aa5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 CNOT11Q9UKZ1 510 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-239ENST00000523685 ZFC3H1O60293 1989 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 DOCK4Q8N1I0 1966 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 LOC101059948A0A1B0GTJ6 334 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 NPIPB15A6NHN6 443 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 GOLGA6L6A8MZA4 724 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 TRAFD1O14545 582 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 INPP4BO15327 924 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 SNX2O60749 519 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 HEXIM1O94992 359 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 CYP2A6P11509 494 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 ERCC2P18074 760 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 TCN2P20062 427 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 NR1D1P20393 614 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 TNFAIP3P21580 790 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 EEF1GP26641 437 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 OAS2P29728 719 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 ANP32AP39687 249 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 CSNK1DP48730 415 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 PIK3CGP48736 1102 aa5.18□□□□□ -1.58
CTNNA1-239ENST00000523685 RENBPP51606 427 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms