RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TSTQ16762 297 aaKnown RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 USP39Q53GS9 565 aaKnown RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 DGKKQ5KSL6 1271 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 ZNF57Q68EA5 555 aaPredicted RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 MSANTD2Q6P1R3 559 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 STRCQ7RTU9 1775 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 GOLGA7Q7Z5G4 137 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 C11orf74Q86VG3 221 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 SLC44A2Q8IWA5 706 aaPredicted RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 NETO1Q8TDF5 533 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 NT5C3BQ969T7 300 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 ZNF583Q96ND8 569 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 ZNF382Q96SR6 550 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 NMRK2Q9NPI5 230 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 ARL15Q9NXU5 204 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 GTF2IRD1Q9UHL9 959 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 VPS4AQ9UN37 437 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 HS3ST4Q9Y661 456 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 COL1A2P08123 1366 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 IQCF5A8MTL0 148 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 H3BN98 237 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 SLITRK5O94991 958 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 HTR7P34969 479 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 SOAT1P35610 550 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 GDF5P43026 501 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 SEMA3BQ13214 749 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 NCF4Q15080 339 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 BCL2A1Q16548 175 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 ATAD3CQ5T2N8 411 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 TYW3Q6IPR3 259 aaKnown RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 SDE2Q6IQ49 451 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 ERAP2Q6P179 960 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 LINC00299Q6ZSB3 139 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 PTCHD4Q6ZW05 846 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 SZRD1Q7Z422 152 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 PEX5LQ8IYB4 626 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 MFSD4AQ8N468 514 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 ARRDC4Q8NCT1 418 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 FUBP1Q96AE4 644 aaKnown RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 ASIC4Q96FT7 647 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 CYP2S1Q96SQ9 504 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 ING3Q9NXR8 418 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 SLCO3A1Q9UIG8 710 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 UTS2RQ9UKP6 389 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 GREB1LQ9C091 1923 aaPredicted RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 TTC34A8MYJ7 566 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 FPGTO14772 594 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 CCNDBP1O95273 360 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 STSP08842 583 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 SMIM10L2AP0DMW4 78 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 SMIM10L2BP0DMW5 78 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 HAPLN1P10915 354 aaPredicted RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 HOXA11P31270 313 aaPredicted RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 PPP2R2BQ00005 443 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 ABRAXAS2Q15018 415 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 CEP78Q5JTW2 689 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 LETMD1Q6P1Q0 360 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 STK40Q8N2I9 435 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 OR2T11Q8NH01 316 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 GFM1Q96RP9 751 aaKnown RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 OR51E2Q9H255 320 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 TRIM45Q9H8W5 580 aaPredicted RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 POPDC3Q9HBV1 291 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 THG1LQ9NWX6 298 aaKnown RBP8.83□□□□□ -1
CSMD1-212ENST00000523387 SPASTQ9UBP0 616 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 N6AMT1Q9Y5N5 214 aa8.83□□□□□ -1
CSMD1-212ENST00000523387 A0A096LPI6 279 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 FAM240BA0A1B0GVZ2 78 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 TNFRSF10AO00220 468 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 KIAA0513O60268 411 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 CRYZL1O95825 349 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 ITGALP20701 1170 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 PSMA1P25786 263 aaKnown RBP8.82□□□□□ -1
CSMD1-212ENST00000523387 C21orf33P30042 268 aaPredicted RBP8.82□□□□□ -1
CSMD1-212ENST00000523387 RRM2P31350 389 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 ADRA1AP35348 466 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 ATP6V1E1P36543 226 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 PBX3P40426 434 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 HTR2BP41595 481 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 CRATP43155 626 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 ABHD18Q0P651 414 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 NPRL3Q12980 569 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 MAD2L1BPQ15013 274 aaPredicted RBP8.82□□□□□ -1
CSMD1-212ENST00000523387 FBXO43Q4G163 708 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 BCL7AQ4VC05 210 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 SLC39A12Q504Y0 691 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 C8orf82Q6P1X6 216 aaPredicted RBP8.82□□□□□ -1
CSMD1-212ENST00000523387 TTC23LQ6PF05 361 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 KDELC1Q6UW63 502 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 LACC1Q8IV20 430 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 CCDC28AQ8IWP9 274 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 CFAP52Q8N1V2 620 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 OR8H1Q8NGG4 311 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 HSH2DQ96JZ2 352 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 COL21A1Q96P44 957 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 SEPT5Q99719 369 aaPredicted RBP8.82□□□□□ -1
CSMD1-212ENST00000523387 SLC22A4Q9H015 551 aa8.82□□□□□ -1
CSMD1-212ENST00000523387 NSUN3Q9H649 340 aaKnown RBP8.82□□□□□ -1
CSMD1-212ENST00000523387 GORASP2Q9H8Y8 452 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms