RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RPN2P04844 631 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 RAB40ALP0C0E4 278 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 CBSLP0DN79 551 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 MLNP12872 115 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 CBSP35520 551 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 PMS2P54278 862 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 CHAF1BQ13112 559 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 DHX34Q14147 1143 aaKnown RBP18■□□□□ 0.47
SPIDR-220ENST00000522900 C1orf189Q5VU69 101 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 CPZQ66K79 652 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 CNSTQ6PJW8 725 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 CILP2Q8IUL8 1156 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 GPR135Q8IZ08 494 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 ZNF655Q8N720 491 aaPredicted RBP18■□□□□ 0.47
SPIDR-220ENST00000522900 OR2L8Q8NGY9 312 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 GSDMBQ8TAX9 411 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 ZNF669Q96BR6 464 aaPredicted RBP18■□□□□ 0.47
SPIDR-220ENST00000522900 NAP1L3Q99457 506 aaPredicted RBP18■□□□□ 0.47
SPIDR-220ENST00000522900 SAMD15Q9P1V8 674 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 TCFL5Q9UL49 500 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 SLC39A10Q9ULF5 831 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 SNX12Q9UMY4 172 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 TLN1Q9Y490 2541 aaKnown RBP18■□□□□ 0.47
SPIDR-220ENST00000522900 FAM237BA0A1B0GVD1 139 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 PRICKLE3O43900 615 aaPredicted RBP17.99■□□□□ 0.47
SPIDR-220ENST00000522900 PHF2O75151 1096 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 RFPL1O75677 317 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 S1PR4O95977 384 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 CHRM3P20309 590 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 OGNP20774 298 aaKnown RBP17.99■□□□□ 0.47
SPIDR-220ENST00000522900 GRIA3P42263 894 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 GBX1Q14549 363 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 LACTB2Q53H82 288 aaPredicted RBP17.99■□□□□ 0.47
SPIDR-220ENST00000522900 FCRL6Q6DN72 434 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 APLFQ8IW19 511 aaPredicted RBP17.99■□□□□ 0.47
SPIDR-220ENST00000522900 NAT8LQ8N9F0 302 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 ADAMTS17Q8TE56 1095 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 DENND1AQ8TEH3 1009 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 THAP4Q8WY91 577 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 DHCR7Q9UBM7 475 aaKnown RBP17.99■□□□□ 0.47
SPIDR-220ENST00000522900 SNX7Q9UNH6 387 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 PLCL2Q9UPR0 1127 aa17.99■□□□□ 0.47
SPIDR-220ENST00000522900 MAGEB16A2A368 324 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 ARGFXA6NJG6 315 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 USP27XA6NNY8 438 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 MKRN2OSH3BPM6 223 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 ZSCAN12O43309 604 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 WISP1O95388 367 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 ESR1P03372 595 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 PDGFAP04085 211 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 HBQ1P09105 142 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 PAMP19021 973 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 PTGIRP43119 386 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 MAGEA3P43357 314 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 ADARP55265 1226 aaKnown RBP17.98■□□□□ 0.47
SPIDR-220ENST00000522900 CTBP1Q13363 440 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 ACSBG2Q5FVE4 666 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 RNF187Q5TA31 235 aaPredicted RBP17.98■□□□□ 0.47
SPIDR-220ENST00000522900 ARMC3Q5W041 872 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 RHBDD2Q6NTF9 364 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 TTC23LQ6PF05 361 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 MCATQ8IVS2 390 aaKnown RBP17.98■□□□□ 0.47
SPIDR-220ENST00000522900 TMEM151BQ8IW70 566 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 DENND6AQ8IWF6 608 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 SEC14L1Q92503 715 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 RAD51AP1Q96B01 352 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 SIGLEC10Q96LC7 697 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 SLC30A3Q99726 388 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 XAB2Q9HCS7 855 aaKnown RBP17.98■□□□□ 0.47
SPIDR-220ENST00000522900 EURLQ9NYK6 297 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.98■□□□□ 0.47
SPIDR-220ENST00000522900 AP1M2Q9Y6Q5 423 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 SPTBP11277 2137 aa17.98■□□□□ 0.47
SPIDR-220ENST00000522900 H3BMM5 538 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 ZSCAN9O15535 394 aaPredicted RBP17.97■□□□□ 0.47
SPIDR-220ENST00000522900 KIF5CO60282 957 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 MATN4O95460 622 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 PKMP14618 531 aaKnown RBP17.97■□□□□ 0.47
SPIDR-220ENST00000522900 AGXTP21549 392 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 PSMB5P28074 263 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 FNTAP49354 379 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 FOXL2P58012 376 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 TLE1Q04724 770 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 FASTKQ14296 549 aaKnown RBP17.97■□□□□ 0.47
SPIDR-220ENST00000522900 NCF4Q15080 339 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 SF1Q15637 639 aaKnown RBP17.97■□□□□ 0.47
SPIDR-220ENST00000522900 ZNF470Q6ECI4 717 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 TCTN3Q6NUS6 607 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 ZNF549Q6P9A3 640 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 FIGLAQ6QHK4 219 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 SLC22A18Q96BI1 424 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 GBP5Q96PP8 586 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 EPN3Q9H201 632 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 FBXO6Q9NRD1 293 aaPredicted RBP17.97■□□□□ 0.47
SPIDR-220ENST00000522900 MAD1L1Q9Y6D9 718 aa17.97■□□□□ 0.47
SPIDR-220ENST00000522900 BSNQ9UPA5 3926 aa17.96■□□□□ 0.47
SPIDR-220ENST00000522900 PFDN6O15212 129 aa17.96■□□□□ 0.47
SPIDR-220ENST00000522900 KLF7O75840 302 aaPredicted RBP17.96■□□□□ 0.47
SPIDR-220ENST00000522900 CCL11P51671 97 aa17.96■□□□□ 0.47
SPIDR-220ENST00000522900 YBX1P67809 324 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms