RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 IL11RAQ14626 422 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 CYHR1Q6ZMK1 362 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 CCDC81Q6ZN84 652 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 PPP1R3BQ86XI6 285 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 NLGN4XQ8N0W4 816 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 IL22RA1Q8N6P7 574 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 C19orf47Q8N9M1 422 aaKnown RBP17.24■□□□□ 0.35
CLK4-211ENST00000522556 SLC38A9Q8NBW4 561 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 NLGN4YQ8NFZ3 816 aaPredicted RBP17.24■□□□□ 0.35
CLK4-211ENST00000522556 OR2L8Q8NGY9 312 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 OR1L3Q8NH93 324 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 FBXO25Q8TCJ0 367 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 RUFY1Q96T51 708 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 OLFM1Q99784 485 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 IL17BQ9UHF5 180 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 PCDHGA4Q9Y5G9 962 aa17.24■□□□□ 0.35
CLK4-211ENST00000522556 MRPS18BQ9Y676 258 aaKnown RBP17.24■□□□□ 0.35
CLK4-211ENST00000522556 A0A0J9YY10 115 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 A0A1W2PPV9 198 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 TMEM150CB9EJG8 249 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 PRICKLE3O43900 615 aaPredicted RBP17.23■□□□□ 0.35
CLK4-211ENST00000522556 PSIP1O75475 530 aaKnown RBP17.23■□□□□ 0.35
CLK4-211ENST00000522556 RPN2P04844 631 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 MAGP20916 626 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 ATP1A2P50993 1020 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 PLTPP55058 493 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 TUBB4BP68371 445 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 ACY1Q03154 408 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 CALCOCO2Q13137 446 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 TUBB2AQ13885 445 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 WHAMMP3Q1A5X7 153 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLK4-211ENST00000522556 UBAP2Q5T6F2 1119 aaKnown RBP17.23■□□□□ 0.35
CLK4-211ENST00000522556 PCSK4Q6UW60 755 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 GPR155Q7Z3F1 870 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 CARFQ8N187 725 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 DLG3Q92796 817 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 ZPBPQ9BS86 351 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 TUBB2BQ9BVA1 445 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 PDE7BQ9NP56 450 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 SLC39A10Q9ULF5 831 aa17.23■□□□□ 0.35
CLK4-211ENST00000522556 CXorf49A8MYA2 514 aaPredicted RBP17.22■□□□□ 0.35
CLK4-211ENST00000522556 C1QAP02745 245 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 STAT5AP42229 794 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 UCNP55089 124 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 MGAT5Q09328 741 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 CBLBQ13191 982 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 KIR2DS3Q14952 304 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 C8orf74Q6P047 294 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 PAQR3Q6TCH7 311 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 GPATCH11Q8N954 259 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 BBOF1Q8ND07 529 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 PPFIBP2Q8ND30 876 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 INPP5DQ92835 1189 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 RAD51AP1Q96B01 352 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 PKP4Q99569 1192 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 MOCS1Q9NZB8 636 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 ADAMTS6Q9UKP5 1117 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 IKZF3Q9UKT9 509 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 UTP11Q9Y3A2 253 aaKnown RBP17.22■□□□□ 0.35
CLK4-211ENST00000522556 FAM208BQ5VWN6 2430 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 ANKRD12Q6UB98 2062 aa17.22■□□□□ 0.35
CLK4-211ENST00000522556 VPS26AO75436 327 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 GPX6P59796 221 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 GPS2Q13227 327 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 ZNF460Q14592 562 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 SLC5A12Q1EHB4 618 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 TTLL9Q3SXZ7 439 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 ATP1A1-AS1Q5TC04 95 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 HECTD2Q5U5R9 776 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 LCN10Q6JVE6 187 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 FAM199XQ6PEV8 388 aaPredicted RBP17.21■□□□□ 0.35
CLK4-211ENST00000522556 SUSD1Q6UWL2 747 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 MBOAT1Q6ZNC8 495 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 KIAA0408Q6ZU52 694 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 CCDC25Q86WR0 208 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 EEF1AKMT1Q8WVE0 214 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 SNRNP27Q8WVK2 155 aaKnown RBP17.21■□□□□ 0.35
CLK4-211ENST00000522556 FOPNLQ96NB1 174 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 RAB17Q9H0T7 212 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 DMGDHQ9UI17 866 aaKnown RBP17.21■□□□□ 0.35
CLK4-211ENST00000522556 TRMT6Q9UJA5 497 aaKnown RBP17.21■□□□□ 0.35
CLK4-211ENST00000522556 CROTQ9UKG9 612 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 COMMD10Q9Y6G5 202 aa17.21■□□□□ 0.35
CLK4-211ENST00000522556 H3BMH7 237 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 MYO1CO00159 1063 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 TERTO14746 1132 aaKnown RBP17.2■□□□□ 0.34
CLK4-211ENST00000522556 SCRG1O75711 98 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 TSPAN12O95859 305 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 MPC1LP0DKB6 136 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 ERGP11308 486 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 FDXRP22570 491 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 FRG1Q14331 258 aaKnown RBP17.2■□□□□ 0.34
CLK4-211ENST00000522556 EFTUD2Q15029 972 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLK4-211ENST00000522556 SOWAHCQ53LP3 525 aaPredicted RBP17.2■□□□□ 0.34
CLK4-211ENST00000522556 TMTC4Q5T4D3 741 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 FCRL6Q6DN72 434 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 TMEM207Q6UWW9 146 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 C6orf15Q6UXA7 325 aaPredicted RBP17.2■□□□□ 0.34
CLK4-211ENST00000522556 NEK10Q6ZWH5 1172 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms